Xylophilus sp. GOD-11R: R9X41_21535
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Entry
R9X41_21535 CDS
T09600
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
R9X41_21535 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xyg03021
]
R9X41_21535 (rpoA)
03400 DNA repair and recombination proteins [BR:
xyg03400
]
R9X41_21535 (rpoA)
Enzymes [BR:
xyg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
R9X41_21535 (rpoA)
Transcription machinery [BR:
xyg03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
R9X41_21535 (rpoA)
DNA repair and recombination proteins [BR:
xyg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
R9X41_21535 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
WPB56691
LinkDB
All DBs
Position
complement(4675685..4676677)
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKAINVEQLGVNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAADIQTPHDVEI
INPDHVIAHLSAGGKLDMQIKVEKGRGYVPGTMRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAISAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PAPRGGNTPFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLESWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacaaacctgctgaaacccaaagcgatcaatgtcgagcaactgggcgtgaaccgc
gccaaggttgcgctggagccgttcgagcgtggctacggccatacgctgggcaacgcgatc
cgtcgcgtgctgctgtcctcgatggtcggctacgccgccactgaagtgaccatcgccggc
gtgctccacgaatactcgtcgatcgatggggtgcaggaagacgtcgtcaacattctgttg
aacctgaagggtgtggtgttcaagctccacaaccgtgacgaagtgaccctctcgctgcgc
aaggatggcgaaggcgtggtcaccgctgccgacatccagacgccgcacgacgtcgagatc
atcaaccctgaccatgtcatcgcccatctgtctgctggcggcaagctcgacatgcagatc
aaggtggaaaagggccgtggctatgtgcctggcacgatgcgccgttatgcggacgaatcg
accaagtcgatcggccgcatcgttctcgatgcatcgttctctccggtcaagcgtgtcagc
tacaccgtcgaaagcgcccgcgttgagcaacgtaccgacctcgacaagctggtcgtcgaa
atcgagaccaacggtgcgatttccgctgaagacgcggtccgcgcttcggccaagatccta
gtcgagcagctggctgtgttcgcgcagctcgaaggcggcgaactcgctgcgttcgatgcg
ccggcacctcgcggtggcaacacgccgtttgatccgatcctgctgcgtccggtcgacgag
ctcgaactcaccgtgcgttcggccaactgcctgaaggccgaaaacatctactacatcggt
gacctgatccagcgcaccgagaacgagttgctcaagaccccgaacctgggtcgcaagtcg
ctcaacgaaatcaaggaagtgctggcctcgcgcggcctgaccctgggcatgaagctggag
agctggccgcccgcaggtctcgacaagcgctga
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