KEGG   Xylophilus sp. GOD-11R: R9X41_21885
Entry
R9X41_21885       CDS       T09600                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
xyg  Xylophilus sp. GOD-11R
Brite
KEGG Orthology (KO) [BR:xyg00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:xyg03400]
    R9X41_21885
Enzymes [BR:xyg01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     R9X41_21885
    5.6.2.6  RNA 3'-5' helicase
     R9X41_21885
DNA repair and recombination proteins [BR:xyg03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    R9X41_21885
SSDB
Motif
Pfam: WH_Lhr DEAD_assoc DEAD Helicase_C ResIII
Other DBs
NCBI-ProteinID: WPB56756
LinkDB
Position
complement(4742674..4745418)
AA seq 914 aa
MNALPRPAAARHAVADWFAEQQWKPFPFQKQVWKALAEGRSGLLHATTGAGKTYAVWLGA
VQAFAHQAFDDGNAPSSRRAPPAAPLTVLWITPMRALAADTLAALRRPLDDLGARHAGIA
RWTAGARTGDTESGERSAQSRRLPTVLVTTPESFTLLLARADAHEVLRSVQLVVADEWHE
LLGNKRGVQLQLAIARLRGWNPALRVWGMSATLGNLQEAMETLLGPREPDDAGVLVQGKI
DKRLVIDTLLPENAARFSWAGHLGLRMLPQVVAELDQAGTTLVFVNVRSQAELWYKAILE
ARPDWAGVLAIHHGSLDRGVREWVEQGLKAGTLKAVVCTSSLDLGVDFLPVERVMQIGSP
KGVARLLQRAGRSGHAPGRPSRVTLVPTHSLEIIEAAAARAAVRAGHVENRVSPHQPVDV
LVQHLATVALGGGFEPEPLYAEVRRTAAYRGLPRAVWDWCLDFVSRGGPSLAAYPDYHRV
QPDEHGVWRLTDKRLARRHRSNIGTIVSDASMVVQIKNGARLGTMEESFLSRLQPGDCFI
FAGRVLEMVKIEQMTAYVKRATAGRPTVPRWGGSRMALSTVLAASLVEQMGLAEAERFDS
PELRSVRPLLELQQRWSALPVPGVLLVETLRTREGWHLFMYPFAGRHAHIGLASLFAWRA
AQREQGTFSIAINDYGLELISATPRDWADLLPELMRLDEQPQALLQEVLGSLNATEMSRR
RFREIARVSGLIFQSHPGERRSNRQLQASAQLFFEVFQKYDQDNMLLRQADEEVLSQELD
IGQLLSSLRKMQTQRLVVKHLERPGPFAFPLMIELFREKLTNENLADRIARMVLQLEDAA
EGRGPDAAQAEEKRSRRPRHGPPRVSPPEPQTAEEQAAAAAIKRDLDFSLTPVDGKTVNR
PRRERKPSRPLPLL
NT seq 2745 nt   +upstreamnt  +downstreamnt
atgaatgccttgcctcgcccggccgccgcgcgccacgccgttgccgactggttcgccgag
cagcaatggaagccgtttccgtttcaaaagcaggtctggaaggccctggccgaggggcgt
tccggcctgctgcacgccaccaccggcgccggcaagacctacgcggtgtggctgggcgcg
gtgcaggccttcgcacaccaggcattcgacgatggcaatgctccgtccagccgccgggca
ccgccggcagcgcccctgacggtgctgtggatcacgccgatgcgcgccctggcggccgac
acgctggcggccttgcgccggccgctggacgacctgggcgcacggcatgccggcatcgcc
cgctggaccgccggcgcgcgtaccggtgataccgaaagcggcgagcgcagtgcgcagtcg
cgccggctgccgacggtgctggtcaccacgccggagagcttcaccctgctgctggcccgc
gccgatgcgcacgaagtactgcgcagcgtgcaactggtggtggccgacgaatggcacgaa
ctgctgggcaacaagcgcggtgtgcagctgcagctggccatcgcccggctgcgcggctgg
aacccggcactgcgggtgtggggcatgtcggccacgctcggcaatctgcaggaggccatg
gaaacgctgctcggcccgcgcgaacccgacgacgccggcgtgctggtgcaaggcaagatc
gacaagcgcctggtcatcgataccctgctgcccgagaacgccgcgcgcttcagctgggcc
ggccacctggggctgcgcatgctgccgcaggtggtggccgagctcgaccaggccggcacc
acgctggtcttcgtcaatgtgcgttcgcaggcggagctttggtacaaggccatcctcgaa
gcgcgaccggactgggcgggcgtgctggcgattcaccacggctcgctcgaccgcggtgtg
cgtgagtgggtggagcaggggctcaaggcgggcacgctcaaggcggtggtctgcaccagc
agtctcgacctgggtgtggactttctgccggtggagcgggtgatgcagatcggctcgccc
aagggcgtggcccggctgttgcagcgcgccgggcgatcgggccacgcgcccggacggccg
tcgcgggtgacgctggtgccaacgcacagcctggagatcatcgaggccgccgccgcgcgc
gctgcggtgcgcgccggccatgtcgagaaccgggtttcgccgcaccagccggtggacgtg
ctggtgcagcacctggcgaccgtcgcgctcggcggcggcttcgagccggagccgctttac
gccgaagtgcgacgcacggcggcctaccgtggcctgccgcgcgcggtgtgggactggtgc
ctggacttcgtctcgcgcggtggcccgtcgctcgccgcctacccggactaccaccgggtg
cagcccgacgagcacggcgtctggcggctcaccgacaagcgcctggcgcggcgccatcgc
agcaacatcggcaccatcgtcagcgatgcgtcgatggtggtgcagatcaagaacggtgcg
cgcctgggcacgatggaagaaagctttctctcgcgcctgcagcccggcgactgcttcatc
ttcgccggccgggtgctggagatggtgaagatcgagcagatgaccgcctacgtgaagcgg
gccaccgccggccggccgacggtgccgcgctggggcggctcgcgcatggccttgtcgacg
gtgctggcggcatcgctggtggaacagatgggtctggccgaagcagagcgtttcgattcg
cccgagctgcgcagcgtgcgtccgctgctggagctgcagcagcgctggtcggcgctgccg
gtgccgggcgtgctgctggtcgaaaccctgcgcacccgcgagggctggcatctgttcatg
tatccctttgccggtcgccatgcgcacatcggcctggcgagcctcttcgcctggcgcgcg
gcgcagcgcgagcagggcacgttttccatcgcgatcaacgactacggcctggagctgatc
agcgccacgccgcgcgactgggcagacctgctgccggaactgatgcggctcgacgagcaa
ccgcaggccttgctgcaggaagtgctgggcagcctgaacgcgaccgagatgtcgcgccgg
cggttccgcgagatcgcgcgggtgtcgggcctcatcttccagagccatcccggtgagcgc
cgcagcaaccggcagctgcaggcgtcggcgcagctgttcttcgaggtgttccagaagtac
gaccaggacaacatgctcctgcgccaggccgacgaggaggtgctgagccaggagctggac
atcggccagctgctctccagcctgcgcaagatgcagacgcagcgcctggtggtgaagcac
ctggagcgcccggggccgttcgcctttcccttgatgatcgagctgttccgcgaaaagctg
accaacgagaatctggccgaccgcatcgcgcgcatggtgctgcagctcgaggacgcagcc
gaagggcgcgggcccgatgcggcacaggccgaggaaaagcgctcccgccgcccccgccac
ggcccgccgcgcgtgtcgccgccagagccgcagacggccgaggagcaggccgcggccgcg
gcgatcaagcgcgacctggatttttcgctgacgccggtggacggcaagacggtcaaccgc
ccgcgccgcgaacgcaagccgtcgcggcccttgcctttgctctag

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