Xylophilus sp. GOD-11R: R9X41_22305
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Entry
R9X41_22305 CDS
T09600
Name
(GenBank) hypothetical protein
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
xyg
Xylophilus sp. GOD-11R
Pathway
xyg00260
Glycine, serine and threonine metabolism
xyg00460
Cyanoamino acid metabolism
xyg00630
Glyoxylate and dicarboxylate metabolism
xyg00670
One carbon pool by folate
xyg00680
Methane metabolism
xyg01100
Metabolic pathways
xyg01110
Biosynthesis of secondary metabolites
xyg01120
Microbial metabolism in diverse environments
xyg01200
Carbon metabolism
xyg01230
Biosynthesis of amino acids
xyg01240
Biosynthesis of cofactors
xyg04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
xyg00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
R9X41_22305
09102 Energy metabolism
00680 Methane metabolism
R9X41_22305
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
R9X41_22305
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
R9X41_22305
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
R9X41_22305
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
R9X41_22305
Enzymes [BR:
xyg01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
R9X41_22305
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Motif
Pfam:
SHMT
Motif
Other DBs
NCBI-ProteinID:
WPB56832
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Position
complement(4826750..4828099)
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AA seq
449 aa
AA seq
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MLSFPDIKKAPIELSKIESVCDALATDFFRDNHYRASHLSMTASENYPSRFVRTMGAGMQ
GAFYEFAPPYFEEHGEWHFPDSGAQSALVQKLTRIGCEGFRAQTFDWRPNGGAAAEQAVL
LGTCSRGDAFVHFAHSDGGHSSLEELARKVGIGIFHLPVRADDLLIDVERLAQLVASHPE
IRMVMLDQSFKLRWQPLAAIRSVLPPAVLLAYDASHDAGLILGGVVPQPLEEGADVLLGN
THKTIPGPQKGFVAFGNAEHPQLKSVSDWVCPLMQSNSHAELLAPFYLAMVEMSLFGRPY
AQQIVKNAKVLALCLRAEGLQVAGESFGYTETHQVHVTIGSPQDALHMASNALARAGVRC
NNIEIPGSGGRHGLRLGVQALTRRGITEVDMATVARFIARVVLRREPPDAIRHEVALFLR
SFPLNPLHYSLDSQYDAPHGVRLREEVFA
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgctttcatttcccgatatcaaaaaagctcccatcgaattatccaaaatagagtcggta
tgcgatgcgctcgccaccgatttctttcgcgataatcattatcgggcctcgcacctgagc
atgacggccagcgagaactatcccagtcgcttcgttcgcaccatgggcgccggcatgcag
ggcgccttctatgagttcgctccaccttattttgaagaacacggcgagtggcactttcca
gactccggcgcccagtcggctttggtgcaaaagctcactcgcatcggctgtgaggggttt
cgcgcccagacattcgactggcgtcccaacggtggtgccgccgccgaacaggcggtcctg
ctcggcacctgctcgcgcggcgacgcctttgtgcatttcgcccatagcgacggcggtcac
tcgtcgctggaagaactggcgcgcaaggtcggcatcggcatattccatctgccggtgcgc
gccgacgacctgctgatcgacgtcgagcggctggcgcaattggtcgcttcgcatcccgag
atccgaatggtgatgctggaccagtcgttcaagttgcggtggcagccgctggcggccatt
cgcagcgtgcttccgcctgcagtactgctggcctacgacgcgagccacgacgccgggctg
attttgggcggtgtggtgccgcagccgctggaagaaggcgctgacgttctcctcggcaac
acgcacaagaccattccggggccgcagaaaggcttcgtggccttcggcaacgcggaacat
ccgcaactcaaatctgtttcggactgggtctgcccgctgatgcagagcaattcgcacgcg
gagttgctggcgccgttctatctcgcgatggtcgagatgtcgctgttcggtcggccctat
gcgcagcaaatcgtgaagaacgccaaggtgctggcgctctgcctgcgggccgagggattg
caggtggcgggagagtcgttcggctataccgaaacgcatcaggtgcacgtcaccatcggc
agcccccaggacgccctgcacatggcgtctaacgccttggcgcgcgctggagttcgctgc
aacaacatcgagattcccggctcgggcggccgccatggccttcggctgggcgtgcaggcg
ctgacacgtcgcggcattaccgaagtcgatatggcgaccgtcgcccgcttcatcgcgcgg
gtcgtgctgagacgggagccgccggacgcgatacgccacgaggtggcactgttcctgcgc
agctttccgttgaacccgctgcattactcgctcgacagccaatacgatgcaccacacggg
gttcggctgcgagaagaagtgtttgcatga
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