Xylophilus rhododendri: GT347_03095
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Entry
GT347_03095 CDS
T06383
Name
(GenBank) dipeptide ABC transporter ATP-binding protein
KO
K02031
peptide/nickel transport system ATP-binding protein
K02032
peptide/nickel transport system ATP-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_03095
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_03095
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GT347_03095
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
AAA_29
AAA_16
Mg_chelatase
nSTAND1
RsgA_GTPase
AAA_23
ATP-synt_ab
NACHT
Sigma54_activat
AAA
nSTAND3
AIG1
AAA_5
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
QHI97061
UniProt:
A0A857J1V2
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All DBs
Position
656412..658076
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AA seq
554 aa
AA seq
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MTTSTQTMKPVLEVTGLDIRLPKGGDRELAVKGAALQLLPGQTLCVVGESGSGKSMIANA
IMGLLPRPHVEPVAGSILFDGQDLLKLDENQLRTLRGRRIGMVFQEPMTALNPVMRIGDQ
IAEVFDAHVNLSAAEKRSRIIAALTDVGLPEPEVLIDSYPFRLSGGQRQRVIIACALAME
PAVLICDEPTTALDVTTQAQILKLIRELQQRKGTAVLFITHDFGVVSEIADQVVVMQTGI
AVEAGAAKDVLTNPQHPYTRKLIAAIPQGTMREPEGASQEPFVLQVQDLHKTYVTGGSLF
KPGRRVHACNGLNFELRRGQTLGIVGESGSGKSTVGRCIVGLNPFDSGRIMFKGKVLAAS
GAEFRAQSRGKIQMVFQDPYASLNPRHRVGAAIAQGPIAQGVSKAEAMARAIELLQLVGL
GPEAADRFPHQFSGGQRQRIGIARALAMQPELLVADEPVSALDVSVQAQVLKLFAEVREK
FQLAMVFITHDLRVAGEMCDHIAVMQRGTIVEYGETAKVLANPQHAYTRTLIEAVPRIAQ
QPGAAEAIPLETSV
NT seq
1665 nt
NT seq
+upstream
nt +downstream
nt
atgacgacctccacgcaaaccatgaaacccgtgctggaagtcaccggcctggacatccgc
ctgcccaagggcggcgaccgcgaactcgccgtcaagggcgccgcgctgcagctcctgccg
ggccagaccctgtgtgtggtcggcgaatcgggctcgggcaaatccatgatcgccaacgcc
atcatgggcctgctgccccgcccgcatgtggagcctgtggccggcagcatcctgttcgac
gggcaggacctgttgaagctcgacgagaaccagctgcgcaccctgcgcggccggcgcatc
ggcatggtgttccaggagccgatgacggcgctgaacccggtgatgcgcatcggcgaccag
atcgccgaggtgttcgatgcgcacgtcaacctcagcgccgccgagaaacgcagccgcatc
atcgcggcgctcaccgacgtcggcctgcccgagcccgaggtgctgatcgacagctatccc
ttccgcctctcgggcggccagcgccagcgggtcatcatcgcctgcgccctggccatggag
ccggccgtgctgatctgcgacgagcccaccaccgcgctcgacgtgaccacgcaggcgcag
atcctcaagctgatccgcgagctgcagcaacgcaagggcacggccgtgctcttcatcacc
cacgacttcggcgtggtctccgagatcgccgaccaggtggtggtgatgcagaccggcatc
gccgtcgaagccggcgcggccaaggacgtgctgaccaacccccagcacccctacacccgc
aagctgatcgccgccatcccgcagggcaccatgcgcgagcccgagggcgccagccaggaa
cccttcgtgctgcaggtgcaggacctgcacaagacctacgtcaccggcggcagcctgttc
aagcccggccgccgggtgcatgcctgcaacggcctgaacttcgaactgcggcgcggccag
acgctgggcatcgtgggcgagtccggctccggcaagtccaccgtgggccgctgcatcgtg
ggcctgaaccccttcgacagcggccgcatcatgttcaagggcaaggtgctggccgcctcc
ggcgccgagttccgcgcgcagtcgcgcggcaagatccagatggtcttccaggacccgtat
gcctcgctcaacccgcgccaccgcgtgggcgcggcgatcgcgcaggggccgatcgcccag
ggcgtgtccaaggccgaggccatggcccgcgccatcgagctgctgcagctggtgggcctg
ggcccggaggccgccgaccgcttcccgcaccagttctccggcggccagcgccagcgcatc
ggcatcgcccgcgcgctggccatgcagcccgagctgctggtggccgacgagccggtgtcc
gcgctcgatgtctcggtgcaggcgcaggtgctcaagctcttcgccgaggtgcgcgagaaa
ttccagctggccatggtcttcatcacccatgacctgcgtgtggccggcgagatgtgcgac
cacatcgccgtgatgcagcgcggcaccatcgtcgaatacggcgagactgccaaggtgctc
gccaacccgcagcatgcctacacccgcaccctgatcgaggccgtgccgcgcatcgcgcag
cagcccggcgcggccgaagccattcccctggaaacctccgtatga
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