Xylophilus rhododendri: GT347_03615
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Entry
GT347_03615 CDS
T06383
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K03701
excinuclease ABC subunit A
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT347_03615
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_03615
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT347_03615
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
GT347_03615
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
UvrA_DNA-bind
nSTAND1
AAA_21
AAA_16
DnaJ_CXXCXGXG
AAA_29
AAA_25
DUF4350
Anti-TRAP
RsgA_GTPase
Motif
Other DBs
NCBI-ProteinID:
QHI97144
UniProt:
A0A857IZV9
LinkDB
All DBs
Position
complement(759713..762361)
Genome browser
AA seq
882 aa
AA seq
DB search
MPSNPEQDKPGLVEVRGAREHNLRNVDVDIPRDRLVVFTGVSGSGKSSLAFGTIYAEAQR
RYLDSVAPYARRLLDQAGTPQVDRIDGLPPAVALQQQRGAPTARSSVGSVTHLADLVRLL
YSRAGSYPPGQAMLFAEDFSPNTPQGACPHCHGLGRVYDATEKTMVPDDRLTIRERAIAA
WPPAWYGQNLRDILVSLGHDVDKPWHRLPKKTRDWILFTDEQPVVPVYAGFSPEETADAI
RRQLAPSYMGTFSSARRYLLHNFATTQSASTKKRVARFLVGTPCPACAGKRLKPEALAVR
FAGLDIGELARLPLAELAERLRPAAEDETGDATPGRATARAARTPARHAGARHEGTPDVT
RTSALSIEKRIAAQRIAIELRERIGRLTRLGLGYLGMERATTTLSSGELQRLRLATQLAS
QLFGVVYVLDEPSAGLHPADGEALLDALEGLRDAGNSVFVVEHDTATMRRAQWLVDVGPG
AGEGGGQVLYSGPPEGLQAVAGSQTARYLFPAQGAAAERTPRTPAGWLRLRGISRHNLME
VDADVPLGCLCAVTGVSGSGKSSLVSQALVELVSDRLGAARQDRPDERTDEPDSPGDEPA
EDMVDMAAAATGRIAEGMEGIQRLVQVDQKPIGRTPRSNLATYTGLFDAVRKLFAATPEA
RERGYGAGRFSFNVPQGRCPVCEGEGFVSVEMMFMPSVYAPCPQCHGARYAPETLEVTWQ
DRNIAEVLGMTVDGAAAFFAAEPAIARPLEVLQQIGLGYLRLGQPATELSGGEAQRIKLA
TELQRLRRGDTLYVLDEPTTGLHPADVDRLLLHLHALADAGNTVVVVEHDMRLVAQSDWV
IDIGPGAGLQGGQVVASGTPREVAGAGKGRTAAYLAEALGQG
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
atgccatcgaacccagaacaagacaagccgggcctggtcgaagtgcgcggcgcccgtgaa
cacaatctgcgcaatgtcgatgtcgacatcccgcgcgaccggctggtggtcttcaccggt
gtctcgggctcgggcaaatcctcgctggccttcggcaccatttacgcggaagcacagcgc
cgctatctcgactcggtggcgccctatgcgcgccgcctgctggaccaggccggcacgccc
caggtggaccgcatcgacggcctgccgccggcagtggccctgcagcagcagcggggtgcg
cccacggcgcgatcgagcgtcggcagcgtcacccacctggcggacctggtgcggctgctg
tattcgcgtgccggcagctatccgccgggccaggcgatgctgttcgccgaagacttctcg
cccaacacgccgcagggcgcctgcccgcactgccacggcctgggccgggtctacgacgcc
accgaaaaaaccatggtgcccgacgaccgcctgacgatacgcgagcgcgccatcgccgcc
tggccgccggcctggtacgggcagaacctgcgcgacatcctggtgtccctcggccacgat
gtggacaagccctggcacaggctgcccaagaagacccgcgactggatcctgttcaccgac
gagcagccggtggtgccggtgtatgccggcttctcgcccgaggagaccgccgacgccatc
cggcgccagctggcgcccagctacatgggcaccttcagcagcgcgcgccgctacctgctg
cacaacttcgcgaccacgcagagcgcctccaccaagaagcgggtggcgcgtttcctggtc
ggcacgccatgcccggcctgcgcgggcaagcggctcaagcccgaggcgctggccgtgcgt
ttcgcgggcctggacatcggcgagctggcgcgcctgccgctggccgaactggccgagcgg
ctgcggcccgccgccgaggacgagaccggcgatgccacccccggccgggccaccgcccgc
gccgcgcgaacgcccgcgcgccatgccggcgccaggcacgagggcacgccggatgtcacc
cgcacctccgcgctgtcgatcgaaaaacgcatcgccgcccagcgcatcgccatcgagctg
cgcgagcgcattggccggctgacaaggctgggcctgggttacctgggcatggagcgggcg
acgaccacgttgtcctccggcgaactgcagcgcctgcgcctggccacgcagctggcctcg
cagctcttcggtgtggtctatgtgctggacgaaccctcggccggcctgcatccggccgat
ggcgaggccctgctcgatgcgctggaaggcctgcgcgatgcgggcaactcggtcttcgtg
gtggagcacgacaccgccaccatgcggcgtgcgcagtggctggtggacgtgggcccgggg
gcgggcgagggcggcggccaggtgctctacagcggcccgcccgaagggctgcaggcggtg
gccgggtcgcagacggcgcgttatctttttcctgcgcagggtgcggcggctgaacgcaca
ccgcgcacgccggccggctggctgcggctgcgcggcatcagccgccacaacctcatggag
gtcgatgcggatgtcccgctcggctgcctttgcgccgtgaccggtgtctcgggctccggc
aagtccagcctggtgagccaggccttggtcgaactggtgtcggaccggctgggcgccgcg
cgccaggacaggccggacgagcggaccgacgagcccgacagccctggcgacgagcccgcc
gaagacatggtggacatggcagccgccgccaccggccgcatcgccgagggcatggaagga
atccagcgcctggtgcaggtggaccagaagccgatcggccgcacgccgcgttccaacctc
gccacctataccggcctgttcgatgcggtgcgcaagctcttcgccgccacgcccgaggcg
cgcgagcgcggttacggcgccggccgtttctccttcaacgtgcctcagggccgctgcccg
gtctgcgagggcgagggcttcgtcagcgtcgagatgatgttcatgcccagcgtctacgcc
ccttgcccgcaatgccatggcgcgcgttatgcgcccgagacgctggaagtcacctggcag
gaccgcaacatcgccgaggtgctgggcatgacggtcgatggcgccgcggcgttcttcgcg
gccgagccggccatcgcaaggccgctggaggtgctgcagcagatcggcctgggttatctg
cgcctgggccagccggccaccgaactctcgggcggcgaggcccagcgcatcaagctggcg
accgagctgcagcggctgcggcgcggcgacacgctctatgtgctggacgagcccaccacc
ggcctgcatccggccgacgtcgaccgcctgctgctgcacctgcacgccctggccgatgcc
ggcaacacggtggtggtggtcgagcacgacatgcgcctggtggcgcagagcgactgggtg
atcgacatcggcccaggcgcaggactgcagggcggccaggtggtggcaagtggcacgcct
cgggaagtggcgggtgcgggcaagggcaggacggccgcctacctggccgaggcactgggc
cagggctga
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