Xylophilus rhododendri: GT347_03870
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Entry
GT347_03870 CDS
T06383
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GT347_03870 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_03870 (recC)
Enzymes [BR:
xyk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
GT347_03870 (recC)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GT347_03870 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
Motif
Other DBs
NCBI-ProteinID:
QHI97191
UniProt:
A0A857J297
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All DBs
Position
817468..821010
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AA seq
1180 aa
AA seq
DB search
MSSAENHPWNGFMAVHGNQPEQLRDLMLAWAARHPLAPLEDERILVQSNGVAQWLKLSLA
RDPAQGGIGIAAALRMELPSRFFWQAYRAVLGAEGVPATSPFDKQLLVWRLMRLLPALLQ
EPVFAPLERFLQDDSDMRKRWQLAQRLADLFDQYQVYRADWLADWAADRDELLTSRHGRQ
EVPQALAWQPRLWRALLDDVGVKPAETSRAAVHRRFLAAAEAWDHDEAPAGLPRRLIVFG
ISSLPQQALEVLAALSRWVQVLLCVHNPSEHDWSHIVADQDLLRAGRQRQRRRAGSPAEV
PEDQLHLHAQPLLAAWGKQGRDFIRLLDQHDEHERYAGRFAAIDQRIDCFVPNAGDTLLR
QLQDDIRALRPLHETRATWPALDAAADASLRFHIVHSPQREVEVLHDQLLAAFAADSTLT
PRDVIVMVPDIAAYAPHIQAVFGLLPADDARHIAFHVADREQRHHDPLLVALESLLALPD
SRLATSDILDLLEVPALQARFRIADEDLPLLRRWIAAAHVRWGLHAEHRESLALPAGMAQ
NSWDFGLQRMLLGYAVGSGGAWEGVEPLAEIGGLDAAVLGPLVDLVNAVEALWRQLSTDA
TPAEWALRLRGLLETFFEAEDGSDGFTLVNLDSALQSWLEACDSAGMHDELPLCVVREAW
LERLDAAGLEQPFFSGAVTFATLLPMRAIPFRVVALLGMNDGDYPRARPAMDFDLMRADY
RPGDRSRREDDRYLFLEALLSARDRLHVSWVGRSIQDQSERPASVLVAQLREHIAAGWRL
AGDEAVAQAYAGERLLDRLTLTHRLQPFDDAYFTAGGDPRLFSYAREWHAEPQAQAPAAA
AALAPWDFEGPLTLKTLTAFLKDPVGQFLQQRLQVHLRLYEEASADQEPFALDGLKNWSL
QDELIQAQAAAMARGEPREAVLQDRLERIARRGELPVGVFSLLQQEDLREPMERMFGNYA
EALQTWPLPLPDAWLEHETASAAGPVRFEDSLDSLHADAAGKRCRILLDSGSLVDGIRTP
SYRLDQLLAPWVAHVAAQLDGQPLSTHIISKVGSVTLRPLTREQAGNYWSTLIDAWQQGM
RRPLPFARKTAAAWLNAKGSNDERRDKARARYELHDPEQQQFGERHDNPALARAYADFDA
LWSDGEFADWIDRLLKPIDQAIERASDKTRGAETDTGEAA
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atgtcctcagcagaaaaccatccctggaacggcttcatggccgttcacggcaaccagccc
gaacagctgcgcgacctcatgctggcctgggccgcgcgccatccgctggcgcccctggaa
gacgaacgcatcctggtgcagagcaacggcgtggcgcagtggctcaagctctcactggcg
cgcgatccggcgcagggcggcatcggcatcgcggccgccctgcgcatggagctgccctcg
cgtttcttctggcaggcctaccgcgcggtgctgggcgccgagggtgtgccggccacctcg
cctttcgacaagcaattgctggtctggcgcctgatgcgcctgctgcccgcgctgctgcag
gagccggtgttcgcgccgctggagcgtttcctgcaggacgacagcgacatgcgaaaacgc
tggcagctggcccagcgcctggccgacctgttcgaccagtaccaggtctaccgcgccgac
tggctggccgactgggccgcggaccgcgacgaactgctgaccagccgacacggccgccag
gaggtgccccaagccctcgcctggcaaccccggctgtggcgcgcgctgctggacgacgtc
ggcgtgaagcccgccgaaaccagccgcgccgccgtgcaccgccgcttcctcgcagcagcc
gaagcctgggaccacgacgaggccccggccggcctgccgcgccggctcatcgtcttcggc
atctcgtcgctgccgcagcaggcgctggaggtgctggccgccctgtcgcgctgggtgcag
gtgctgctgtgcgtgcacaaccccagcgagcacgactggtcccacatcgtcgccgaccag
gacctgctgcgcgccggccgccagcgccagcgccgccgcgccggcagcccggccgaggtg
cccgaggaccagttgcacctgcatgcccagcccctgctggcggcctggggcaagcagggc
cgcgacttcatccgcctgctcgaccagcacgacgaacacgagcgctacgccggccgcttc
gccgccatcgaccagcgcatcgactgcttcgtgcccaatgccggcgacaccctgctgcgc
cagctgcaggacgacatccgcgccctgcgcccgctgcacgagacccgcgccacctggccc
gcgctggacgcggcggccgatgcatccctgcgctttcacatcgtgcacagcccgcagcgc
gaggtggaggtgctgcacgaccagctgctggccgccttcgccgccgactcgacactcacc
ccgcgcgacgtgatcgtgatggtgccggacatcgccgcctacgcaccgcacatccaggcc
gtcttcggcctgctgccggcggacgacgcgcgccacatcgccttccatgtggccgaccgc
gaacagcgccaccacgacccgctgctggtggcgctggaaagcctgctcgccctgcccgac
tcccgcctggccaccagcgacatcctggacctgctcgaagtaccggccctgcaggcgcgc
tttcgcatcgccgacgaagacctgccgctgctgcgccgctggatcgccgccgcccatgtg
cgctggggcctgcatgccgagcaccgcgagtcgctcgccctgcccgccggcatggcgcag
aacagctgggacttcggcctgcagcgcatgctgctcggctatgccgtcggcagcggaggc
gcctgggaaggcgtggagccgctggccgagatcggcgggctggacgcggccgtgctcggc
ccgctggtcgatctggtgaacgcggtcgaagcgctctggcgccaattgagcaccgacgcc
acgccggccgaatgggcgctgcgcctgcgcggcctgctggagaccttcttcgaagccgag
gacggcagcgacggcttcaccctggtcaatctcgacagcgccctgcagtcctggctggag
gcctgcgacagcgccggcatgcacgacgaactgccgctgtgcgtggtgcgcgaagcctgg
ctggagcgcctggatgcggccggactggagcagcccttcttctccggcgcggtcaccttc
gccacgctgctgccgatgcgtgcgattcccttccgggtggtggcgctgctgggcatgaac
gacggcgactatccgcgcgcccggccggccatggacttcgacctgatgcgcgccgactac
cgccccggcgaccgctcgcgccgcgaggacgaccgctacctgttcctggaagcgctgctg
tcggcgcgcgaccggctgcatgtgagctgggtcggccgcagcatccaggaccagtccgag
cgcccggcctcggtgctggtggcgcagctgcgcgaacacatcgcggccggctggcggctg
gcgggcgacgaggccgtggcacaggcctacgccggcgagcggctgctggatcgcctcacg
ctgacgcaccgcctgcagcccttcgacgatgcctatttcaccgccggcggcgatccgcgc
ctgttcagttatgcccgcgaatggcatgccgagccgcaggcgcaggccccggcggccgca
gccgcgctggcgccatgggacttcgaaggcccgctcaccctgaagacgctgaccgccttc
ctgaaggaccccgtcggccagttcctgcagcagcggctgcaggtgcacctgcggctgtac
gaagaggccagcgccgaccaggaacccttcgcgctcgacggcctgaagaactggtcgctg
caggacgaactcatccaggcgcaagccgccgccatggcccgcggcgagccgcgcgaggcg
gtgctgcaggaccggctggagcgtatcgcccggcgcggcgaactgccggtgggcgtgttc
tcgctgctgcagcaggaagacctgcgcgagccgatggagcgcatgttcggcaactacgcg
gaggcgctccagacctggcccctgccgctgccggacgcctggctggagcacgaaaccgcg
agcgccgccgggccggtgcgtttcgaggattcgctggattccctgcatgccgacgccgcc
ggaaagcgctgccgcatcctgctcgacagcggctccctggtggatggcatccgcacgccg
agctatcgcctcgaccagctgctggcgccctgggtcgcccatgtggccgcgcagctcgac
ggccagccgctcagcacccacatcatcagcaaggtcggcagcgtgaccctgcggccgctg
acccgggagcaggcagggaactactggtccaccctgatcgatgcctggcagcaaggcatg
cgccgccccctgcccttcgcccggaaaaccgccgcggcctggctcaacgccaagggatcg
aacgacgagaggcgggacaaggctcgcgccaggtacgagctgcacgaccccgaacaacag
cagttcggcgagcgccacgacaaccccgccctggcgcgtgcctatgcggacttcgatgcc
ctgtggtcggacggcgaattcgccgactggatagaccggctgctcaagcccatcgaccag
gccatagaacgcgccagcgacaaaacacgcggcgccgagacagacaccggagaagcggca
tga
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