Xylophilus rhododendri: GT347_04250
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Entry
GT347_04250 CDS
T06383
Symbol
kdsB
Name
(GenBank) 3-deoxy-manno-octulosonate cytidylyltransferase
KO
K00979
3-deoxy-manno-octulosonate cytidylyltransferase (CMP-KDO synthetase) [EC:
2.7.7.38
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk00541
Biosynthesis of various nucleotide sugars
xyk01100
Metabolic pathways
xyk01250
Biosynthesis of nucleotide sugars
Module
xyk_M00063
CMP-KDO biosynthesis, ribulose-5P => CMP-KDO
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
GT347_04250 (kdsB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
xyk01005
]
GT347_04250 (kdsB)
Enzymes [BR:
xyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.38 3-deoxy-manno-octulosonate cytidylyltransferase
GT347_04250 (kdsB)
Lipopolysaccharide biosynthesis proteins [BR:
xyk01005
]
Lipid A
GT347_04250 (kdsB)
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Gene cluster
GFIT
Motif
Pfam:
CTP_transf_3
NTP_transf_3
DUF3142
Motif
Other DBs
NCBI-ProteinID:
QHI97259
UniProt:
A0A857J296
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Position
898047..898829
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AA seq
260 aa
AA seq
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MSTPATPAAPPVFTVLIPARLASSRLPDKPLADIGGLPMVVRVARQAQISGAARTVVAAD
SPSIIDACRRHGVEALLTRIDHSCGSDRLAEACDLLGLSDDAIVVNVQGDEPLMPAELIA
SVAELLHQRPEADIATAAHAIESLEDFRNPNVVKVVTDRSGLALYFSRAPIAWQRDGSAA
GAPILPTPRPLRHIGIYAYRVRFLRAFPTLEQAPLELSEALEQLRALWHGRRIAVLDVEH
PPAGGVDTPEDLARVRTLFL
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgtccacgcccgccacgcccgccgcgccccctgtcttcaccgtcctcatccccgcccgc
ctcgcctccagccgcctgccggacaaacccctggccgacatcggcggcctgcccatggtg
gtgcgggtggcgcgccaggcgcagatctccggcgccgcgcgcaccgtggtcgcggccgac
agcccctccatcatcgacgcctgccgccgccacggcgtggaagccctgctcacccgcatc
gaccacagctgcggcagcgaccgcctggccgaggcctgcgacctgctgggcctgtccgac
gacgccatcgtcgtcaacgtgcagggcgacgagcccctgatgcccgccgagctgatcgcc
tccgtcgccgaactgctgcaccagcgccccgaggccgacatcgccaccgccgcgcacgcc
atcgaatccctggaagacttccgcaaccccaacgtggtgaaggtggtgaccgaccgcagc
ggcctcgccctctacttcagccgcgcgccgattgcctggcagcgcgacggcagcgcggcc
ggagcgcccatcctgcccaccccccggccgctgcgccacatcggcatctacgcctaccgc
gtgcgattcctgcgcgcctttccgacactggaacaagcgcccctggaactcagcgaggcc
ttggagcagttgcgcgcgctctggcacggacggcgcatcgccgttctggatgtcgaacac
ccccccgccggcggcgtcgacacccccgaagacctggcgcgcgtacggaccttgttcctc
tag
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