Xylophilus rhododendri: GT347_04840
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Entry
GT347_04840 CDS
T06383
Name
(GenBank) AAA family ATPase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03420
Nucleotide excision repair
xyk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT347_04840
03430 Mismatch repair
GT347_04840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_04840
Enzymes [BR:
xyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT347_04840
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT347_04840
MMR (mismatch excision repair)
Other MMR factors
GT347_04840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD_C
UvrD-helicase
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
TubC_N
Maf_N
Motif
Other DBs
NCBI-ProteinID:
QHI97367
UniProt:
A0A857J1B1
LinkDB
All DBs
Position
complement(1076394..1078310)
Genome browser
AA seq
638 aa
AA seq
DB search
MAPTLLIQARAGAAKTTTLALRLAEAWSRGAAPADCLVLTATEAACDAFREALVAVGMPG
EAVQRFRIETFENFAATILLGLEDGAKVPRRLGPEELRETVWQAVRQVAEQEDERWPEDI
EYPSEGDSVFVAEFLDNMLWLKGTLKLQLDAPEGALTPDDALEMGQRYMTLRTLRAYERL
RAGGHPDRPAFRGPFDATYDLARRLLLDREDGIATPAPGWPARLRVLLVDEMHDMNEAMY
QVLLHLLAGRSTFFTGVGDADQVIHAAAGADAAFMDCRIDRDTRRSTEFLPLSASFRFGP
TLARAAARFIDKRLDAGGETATKLTVASYTDETDCAAQLLDALKAGRKAAPRNAAGLAVL
LRHDHHSIAIENALVHGGIAYRTRGLESYLLRPEVLLVRCLLAIATRDFASLEGRDTLSR
LVLAFMLFCGTRFDEDPERPEAGQAVLMAEALRDFAGNAENLPLFLQNHVLRKAEPGVAR
RLRAALAVVAGAADGESVFDRFLDALDMPWFIAQALVRPERRAGALRHLAGLRALAAHYP
DTRSFFGHLNETAVRQAGMKRSGAITLASAAAVKGLEFREVFLPFLEQGEFPYEQGRKAD
EANLFYVAITRARQSLRLFVHAVRPSEFVAQAGLKLPD
NT seq
1917 nt
NT seq
+upstream
nt +downstream
nt
gtggcgcccacgctgctgatccaggcccgcgccggcgccgccaagaccaccaccctggcc
ctgcgcctggccgaggcctggtcgcgcggcgccgcgccggccgactgcctggtgctgacc
gccaccgaggcagcctgcgatgccttccgcgaggcgctcgtcgccgtcggcatgcccggc
gaggcggtgcagcgtttccgcatcgagaccttcgagaacttcgccgcgaccatcctgctg
ggtctggaagacggtgccaaggtgccgcgcaggctgggccccgaggaactgcgcgagacg
gtctggcaggcggtgcgccaggtggccgagcaggaggacgaacgctggcccgaggacatc
gaatacccgagcgagggcgattcggtcttcgtcgccgaattcctggacaacatgctctgg
ctcaagggcacactcaagctccagctcgatgcgcccgaaggggctctgacgcccgacgat
gccctggagatgggccagcgctacatgacgctgcgcaccctgcgcgcctacgagcgcctg
cgcgccggcggccatcccgaccggccggccttccgcgggccgttcgacgccacctacgac
ctggcgcggcgcctgctgctggaccgcgaggacggcatcgccactcccgcgcccggctgg
ccggcgcgtctgcgggtgctgctggtcgacgagatgcacgacatgaacgaggcgatgtac
caggtgctgctgcatctgctcgccgggcgcagcaccttcttcaccggcgtgggcgatgcc
gaccaggtgatccatgcggcggccggcgcggacgccgccttcatggactgccgcatcgac
cgcgacacccgccgcagcaccgaattcctgccgctgagcgcgagtttccgtttcggcccc
acgctggcgcgcgcggccgcgcgtttcatcgacaagcggctggatgcgggcggcgagacg
gccaccaagctcacggtggcgagctacaccgacgagaccgattgcgccgcccagctgctc
gatgccctcaaggccggccgcaaggccgcgccgcgcaatgccgccggcctggcggtgctg
ctgcggcacgaccaccattcgatcgccatcgagaacgccctggtgcacggcggcatcgcc
taccgcacccgcggcctggagagctatctgctgcgccccgaggtgctgctggtgcgctgc
ctgctggccatcgccacccgcgacttcgccagcctggaggggcgcgacaccctctcgcgc
ctggtgctggccttcatgctgttctgcggcacgcgtttcgacgaagaccccgagcggccg
gaagccggccaggcggtgctgatggccgaggccctgcgcgacttcgccggcaatgccgag
aacctgccgctcttcctgcagaaccatgtgctgcgcaaggccgagcccggcgtggcgcgc
cgcctgcgcgcggccctggccgtggtggccggcgcggcggatggcgagtcggtgttcgac
cgcttcctggatgcgctcgacatgccctggttcatcgcccaggccctggtgcggccggag
cgccgcgcgggggcgctgcggcacctggccgggctgcgggccctggccgcgcactatccc
gatacccggtccttcttcggccacctcaacgagacggcggtgcgccaggccggcatgaaa
cgcagcggtgcgatcacgctggcgagcgccgcggccgtcaaggggctggagttccgcgag
gtgttcctgcctttcctggagcagggcgagttcccctacgagcagggccgcaaggcggac
gaggccaatctcttctacgtggcgatcacacgcgcccggcagtcgctgcggctcttcgtg
catgcagtgcggcccagcgaattcgtggcgcaggcagggctgaagctgccggactga
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