Xylophilus rhododendri: GT347_06095
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Entry
GT347_06095 CDS
T06383
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03410
Base excision repair
xyk03430
Mismatch repair
xyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
GT347_06095 (recJ)
03430 Mismatch repair
GT347_06095 (recJ)
03440 Homologous recombination
GT347_06095 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_06095 (recJ)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
GT347_06095 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
GT347_06095 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
GT347_06095 (recJ)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DHH
RecJ_OB
DHHA1
Motif
Other DBs
NCBI-ProteinID:
QHJ01431
UniProt:
A0A857JBP5
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All DBs
Position
1360228..1361907
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AA seq
559 aa
AA seq
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MEQAGVHPLLARLFAARGVRSHDELDDGLGRLLLPAGLLGAAEAAVLLADAIRDDLRICV
VADYDCDGATACAVAVRGLRLLGAKHVDYLVPDRVVDGYGLTPSIAQRVADKGCDLLVTV
DNGIASVDGVAFAHALGLKVLVTDHHLPGPVLPRADVLVNPNQPACAFESKCIAGCGVMF
YVLLALRAEQRARGLYEGQPQPKLDQLLPLVALGTVADVVKLDANNRRLVAQGLSRIRRG
AMQPGIAALFEAAGRKAVSATAFDFGFALGPRINAAGRLADMTLGIECLLTDDRSRADEL
ARMLDTINRERRDIEGGMRDDAMAMAETLFAGGGLESPPAAICVFGEDFHEGVVGIVASR
LKDKLHRPTFVFAASAAPGKEMELKGSGRSIPGFHLRDALDLVAKRHPGVLLKFGGHAMA
AGCTIAREHFETFRDALAQVADEWLDEATLTRRIETDGPLAPEYRRADMIDTLHSAVWGQ
GFAAPTFSEELQVVSQKLVGERHLQLKLLHQGQPVDGIWFGHTEVLPARVKLAFRLDVNE
WRGERRVQFLVEAAELPAG
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
ctggagcaggccggcgtgcatccgctgctggcgcgcctattcgccgctcgtggcgtgcgc
agccacgacgaactcgacgacggcctgggccgcctgctgctgcccgccggcctgctgggc
gcggccgaggctgccgtgctgctggccgatgcaatccgcgatgacctgcgcatctgcgtg
gtcgccgactacgactgcgatggcgccaccgcctgcgcggtcgccgtgcgcggcctgcgc
ctgctgggcgcgaaacacgttgattacctggtgcccgaccgggtggtggacggctacggc
ctcaccccctccatcgcccagcgcgtggccgacaagggctgcgacctgctggtgacggtg
gacaacggcatcgccagcgtggacggcgtggccttcgcccacgccctcggcctgaaggtg
ttggtgaccgatcaccacctgcccggcccggtgctgcctcgggccgacgtgctggtcaat
cccaaccagccggcctgcgctttcgagagcaaatgcattgccggctgcggggtgatgttc
tatgtgctgctggcactgcgggccgagcagcgcgcccgcggcctgtacgaaggccagccg
cagcccaagttggaccagttgctgccgctggttgcgctgggcacggtggccgacgtggtc
aagctcgatgccaacaaccgccggctggtggcgcaggggctttcgcgcatccgccgcggg
gcgatgcagccgggcatcgccgcgctgttcgaggcggccgggcgcaaggcggtgtcggcc
acggctttcgatttcggcttcgcgctgggcccgcgcatcaacgccgccggccgcctggcc
gacatgacactcggcatcgaatgcctgctgaccgatgaccgttcgcgcgccgacgaactc
gcgcgcatgctggacaccatcaaccgcgagcgccgcgacatcgaaggcggcatgcgcgac
gacgccatggccatggccgaaaccctgttcgccggcggtgggctggaatcgccgccggcc
gcgatctgcgtgttcggcgaggacttccacgaaggcgtggtcggcatcgtcgcctcccgc
ctcaaggacaagctgcaccgccccaccttcgtcttcgccgccagcgcggcgccgggcaag
gaaatggagctgaagggctcgggccgctcgatcccgggcttccacctgcgcgacgcgctg
gacctggtggccaagcgccatcccggcgtgctgctgaagttcggcggccacgccatggcc
gccggctgcaccatcgcccgcgagcatttcgagaccttccgcgatgccctggcccaggtc
gccgacgaatggctggacgaggccaccctcacccgccgcatcgagaccgacggccccctg
gcgcccgaataccgccgcgccgacatgatcgacaccctgcacagcgccgtctggggccag
ggtttcgccgcgccgaccttcagcgaggaactgcaggtggtcagccagaagctggtgggc
gagcggcacctgcagctgaagctgctgcaccagggccagccggtggacggcatctggttc
ggccacacggaagtgctgccggcgcgggtgaagctggccttccggctggatgtgaacgaa
tggcggggggagcggcgggtgcagtttctggtggaggcggcggagctgccggcgggttag
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