Xylophilus rhododendri: GT347_06930
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Entry
GT347_06930 CDS
T06383
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_06930
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_06930
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GT347_06930
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
QHI97746
UniProt:
A0A857J200
LinkDB
All DBs
Position
complement(1528105..1529703)
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AA seq
532 aa
AA seq
DB search
MTIGKTSKSWLGRTGAALALTAVATLFNPAGAQTLSVVMASKLTVLDPVLTASHQTRNHG
YMIYDTLLATDLDNKIQPQMADKWTISPDGKTYTFTLREGLKFHDGAPVKSEDCIASIQR
WAQQDKIGRQVMPLVTEMTPVDDKTFKVVLSKPVDLLTALARPSGLPSFIMPKRVAMTPA
TQAITDYTGSGPFKFVKAEFQPGVKVVYEKNKDYVPRKEAPSGVAGGKVVNVDRVEWVAM
ADSMTMVNALTSGEVDYVETVPFDLVPMVKASKGVTVRTLDKLGYQPMYRFNQLQPPFDN
KLIRQAAMYAIGQDETLKAQVGDPAYFKTCAAVFGCNLPYSSNKHADMIVPSNIAKAKEL
LKQAKYDGAPVAILHATDIAMASALPVVMAQELRQAGFNVQLQAMDFMTMLSRRANRDVP
AKGGWSIFVTTWHTSEISDPLRNYGISANGEKAWFGWPTVPAIESLRENFLFARTDKERK
DIAEQLQDVMLDEGVAVTLGQIVTAAAYSNKLSGVLESPAPVFWNIKKSDAK
NT seq
1599 nt
NT seq
+upstream
nt +downstream
nt
atgaccattggcaaaacaagcaagtcctggctgggccgcaccggcgccgcgctggcgctg
acggcagtcgccaccctgttcaacccggcgggcgcccagaccctgtcggtggtcatggcc
agcaagctcaccgtgctcgacccggtgctgaccgcctcgcaccagacgcgcaaccacggc
tacatgatctacgacacgctgctggcgaccgacctggacaacaagatccagccgcagatg
gccgacaagtggaccatctcgcccgacggcaagacctacaccttcaccctgcgtgagggc
ctgaagttccacgacggcgccccggtcaaatccgaggactgcatcgcctccatccagcgc
tgggcgcagcaggacaagatcggccgccaggtcatgcccctggtcaccgagatgaccccg
gtggacgacaagaccttcaaggtggtgctctccaagccggtcgacctgctcaccgccctg
gcccgccccagcggcctgcccagcttcatcatgcccaagcgggtggcgatgacaccggcg
acccaggccatcaccgactacaccggctccggccccttcaagttcgtcaaggccgagttc
cagcccggcgtgaaggtggtctacgagaagaacaaggactacgtgccgcgcaaggaggcg
cctagcggcgtggccggcggcaaggtggtcaacgtcgaccgcgtggaatgggtggccatg
gccgactccatgaccatggtcaacgcactcaccagcggcgaggtcgattacgtcgagacc
gtgcccttcgacctggtgcccatggtcaaggccagcaagggcgtgaccgtgcgcacgctc
gacaagctgggctaccagcccatgtaccgcttcaaccagctgcagccgcccttcgacaac
aagctgatccgccaggccgccatgtacgccatcggccaggacgagaccctcaaggcccag
gtcggcgaccccgcctacttcaagacctgcgcggccgtcttcggctgcaacctgccgtat
tcgagcaacaagcacgccgacatgatcgtgccctcgaacatcgccaaggccaaggaactg
ctcaagcaggccaagtacgacggcgcgccggtggccatcctgcatgccaccgacatcgcc
atggcctcggccctgccggtggtgatggcgcaggagctgcgccaggccggcttcaacgtg
cagctgcaggccatggacttcatgaccatgctctcgcgccgcgccaaccgcgacgtgccg
gccaagggcggctggagcatcttcgtgaccacctggcacaccagcgagatctccgacccg
ctgcgcaactacggcatctcggccaacggcgagaaggcctggttcggctggcccaccgtg
cccgccatcgaatcgctgcgcgagaacttcctgttcgcccgcaccgacaaggaacgcaag
gacatcgccgagcagctgcaggacgtgatgctggacgagggcgtggccgtgaccctgggc
cagatcgtcaccgccgccgcctacagcaacaagctctcgggcgtgctggaatcgccggcc
ccggtgttctggaacatcaagaagtccgacgccaagtaa
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