Xylophilus rhododendri: GT347_08630
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Entry
GT347_08630 CDS
T06383
Name
(GenBank) RluA family pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xyk03009
]
GT347_08630
Enzymes [BR:
xyk01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
GT347_08630
Ribosome biogenesis [BR:
xyk03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
GT347_08630
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
T3SS_CopN_3rd
FAS_meander
Sec23_BS
Motif
Other DBs
NCBI-ProteinID:
QHI98054
UniProt:
A0A857J2A5
LinkDB
All DBs
Position
complement(1881111..1882052)
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AA seq
313 aa
AA seq
DB search
MTVDAESAGQRLDNFLMRHLKGVPKTHVYRIIRSGEVRINKGRVAADTRVQEGDEVRLPP
VRVAAAPTEEAVRAVPPREFPVLYEDDALVAIDKPAGTAVHGGSGVSFGVIEQLRRARPE
ARFLELVHRLDRDTSGILLIAKKRSALTRLQDQFRERATDKTYLALVQGTWPARQKVLDQ
PLRKYLLPDGERRVRVTTADDPEAMRAITLVKLRSVAPARTLQGLPALSLLEVTIKTGRT
HQIRVHLSSAGHGIAGDDKYGDFDLNGRLQKAGLGRMFLHAWRLQFDHPASGERIALQAE
LPPELARWEPAAG
NT seq
942 nt
NT seq
+upstream
nt +downstream
nt
gtgacggtcgatgcggaatctgccgggcagcgcctcgacaacttcctgatgcggcacctc
aagggggtgccgaagacgcatgtctaccgcatcatccgcagcggcgaagtgcgcatcaac
aaagggcgcgtggccgcggacacgcgggtgcaggagggcgacgaggtgcgcctgccgccg
gtgcgtgtcgccgccgcgccgaccgaggaggcggtgcgtgcggtgccgccgcgcgaattc
cctgttctgtacgaggacgatgcgctcgtggccatcgacaagcccgccggtacggcggtg
catggcggcagcggggtgagtttcggtgtcatcgagcagctgcggcgggcgcggcccgag
gcgcgtttcctggagctggtgcataggctggaccgggacacctcgggcatcctgctcatc
gccaagaagcgctcggcgctgacccggctgcaggaccagttccgcgaacgcgccaccgac
aagacctatctcgccctggtgcagggcacctggccggcgcgccagaaggtgctggaccag
ccgctgcgcaaatacctgctgcccgacggcgagcggcgggtgcgtgtgaccactgccgac
gatccggaggcgatgcgggcgatcaccctcgtgaagctgcgctcggtcgcgccggcgcgc
accttgcagggcctgccggcgctcagcctgctggaggtgacgatcaagaccgggcgcacc
caccagatccgggtgcatctttcctcggccggccacggcatcgcgggcgacgacaagtac
ggcgacttcgacctcaacggccggctgcagaaggccggcctgggccgcatgttcctgcat
gcctggcggctgcagttcgaccatccggccagcggcgagcgcatcgccctgcaggccgaa
ctgccgccggaactggcccgctgggagccggcggcggggtga
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