Xylophilus rhododendri: GT347_09620
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Entry
GT347_09620 CDS
T06383
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk00300
Lysine biosynthesis
xyk00470
D-Amino acid metabolism
xyk01100
Metabolic pathways
xyk01110
Biosynthesis of secondary metabolites
xyk01120
Microbial metabolism in diverse environments
xyk01230
Biosynthesis of amino acids
Module
xyk_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
GT347_09620 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
GT347_09620 (lysA)
Enzymes [BR:
xyk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
GT347_09620 (lysA)
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GFIT
Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
Motif
Other DBs
NCBI-ProteinID:
QHI98227
UniProt:
A0A857J3I5
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All DBs
Position
2087277..2088560
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AA seq
427 aa
AA seq
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MIPSPLPGAPQLAYRDDALHLEDVALADLARSHGTPLYVYSKAAMLGALAAYQRGFAGRE
VQICYAMKANSTLGVLQLFARAGCGFDIVSGGELRRVLAAGGEAAKVIFSGVGKTQAEMR
EALAAGIGCFNVESEAEIDVLDAVAREMGAVAPISIRVNPNVDPKTHPYISTGLKGNKFG
VAHERAVAVYQHAAALPGLRVLGIDCHIGSQITEETPYLDAMDRVLDLVAAIEAQGIRLH
HIDFGGGLGIDYQGDTPPAADALWTRLLARLDARGYGQRKLLIEPGRSLVGNAGVCLTEV
LYNKPGESKNFCIVDAAMNDLPRPAMYQAYHAIVPLRLPAAGAATTTVDVVGPVCESGDW
LGRDRVLSVRPGDHLAVLSAGAYCMSMASNYNSRGRGAEVLVDGAVAHLIRQRETSEDQM
RGERLPD
NT seq
1284 nt
NT seq
+upstream
nt +downstream
nt
atgatcccctcccccctgccgggcgcgccgcagctcgcctaccgtgacgacgctctgcac
ctggaagacgtcgccctggccgatctggcccgcagccacggcacgcccctctacgtgtat
tccaaggccgcgatgctgggagcgctggccgcctaccagcgcggcttcgcgggccgcgag
gtgcagatctgctacgccatgaaggccaactcgaccctgggcgtgctgcagctgttcgcc
cgcgccggctgcggcttcgacatcgtctccggcggcgaactgcgccgggtgctggccgcg
ggcggcgaggcggccaaggtgatcttttccggcgtcggcaagacgcaagccgaaatgcgc
gaggcgctggccgccggcatcggctgcttcaacgtggagagcgaggccgagatcgacgtg
ctcgacgccgtcgcccgcgagatgggcgcggtcgcgccgatcagcatccgggtcaatccc
aacgtcgatcccaagacgcatccctacatctccaccggcctgaagggcaacaagttcggc
gtggcgcacgaacgcgcggtggcggtctaccagcatgcggccgcactgcccggcctgcgg
gtgctgggcatcgactgccacatcggctcgcagatcaccgaggagacgccctacctcgac
gccatggaccgggtgctcgacctggtcgcggccatcgaggcccagggcatccgcctgcac
cacatcgatttcggcggcggcctgggcatcgactaccagggcgacacgccgcccgccgcc
gacgccctctggacccggctgctggccaggctcgacgcccgcggctacggccagcgcaag
ctgctgatcgagcccggccgctcgctggtgggcaatgccggcgtctgcctgaccgaggtg
ctctacaacaagcccggcgaaagcaagaacttctgcatcgtcgatgccgccatgaacgac
ctgccgcggccggccatgtaccaggcctatcacgccatcgtgcccctgcgcctgcccgcc
gcgggcgcggcgacgacgacggtggacgtggtcggccccgtctgcgaaagcggcgactgg
ctgggccgcgaccgcgtgctgtcggtgcggccgggcgaccatctcgcggtgctgtcggcc
ggcgcgtactgcatgagcatggccagcaactacaactcgcgcggccgcggcgcggaagtg
ctggtggacggcgcggtggcccatctcatccgccaacgcgagaccagcgaagaccagatg
cgcggcgaacgcctgccggactga
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