Xylophilus rhododendri: GT347_09870
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Entry
GT347_09870 CDS
T06383
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_09870
Enzymes [BR:
xyk01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
GT347_09870
DNA repair and recombination proteins [BR:
xyk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
GT347_09870
Prokaryotic type
GT347_09870
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
QHI98274
UniProt:
A0A857J2W3
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All DBs
Position
2136563..2138038
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AA seq
491 aa
AA seq
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MDKKYSAGLVWFRRDLRTDDHAALHHALRSCAKVYCTFVFDTAILEALPRADRRVEFIHD
SLVEVDRSLRELSGHEAGGLITLHGKAQAVLPHLARDLGVQAVFASHDDEPYALERDAQV
LGALANAGIVLHLGKDHTIFERDEVMTQAGTAFSVFTPYKRAWLKKVDDFYLRGYPVEKH
AHALAARPERFREAVPPLSALGFEPTNLKQLGIPTGMSGGQQLWEDFFDRLDDYDDTRNF
PAVKGPSYLGIHLRFGTVSVRALAHAAYQRLQHGGSRKGAETWLGELIWRDFFTQILYHQ
PHVVGHAYRPEYDALKWEHGKQADAHFQAWCEGRTGYPLVDAAMAQINQSGYMHNRLRMV
AASFLVKDLGIDWRRGEAYFAEHLNDFELSSNNGNWQWAASTGCDAQPWFRIFNPVTQSR
RFDPHGKFIRRYLPQLARLSDDEIHAPWTATPVELEAAGLVLGRDYPEPIVDHETARQKT
LARYSAARPPK
NT seq
1476 nt
NT seq
+upstream
nt +downstream
nt
atggacaagaagtattccgccggcctcgtctggtttcgccgcgatctgcgcaccgacgac
catgccgccctgcaccatgccctgcgcagctgtgccaaggtctattgcaccttcgtcttc
gacaccgccatactggaggcgctgccgcgcgccgaccggcgggtggagttcatccacgat
tcgctggtcgaggtcgatcgctccctgcgcgaactctccggccacgaggccggcggcctg
atcaccctgcacggcaaggcccaggcggtgctgccccacctggcacgcgacctgggcgtg
caggcggtgttcgccagccacgacgacgagccctatgcgctggagcgcgacgcccaggtg
ctgggcgcgctggccaatgccggcatcgtgctgcacctcggcaaggaccacacgatcttc
gaacgcgacgaggtgatgacccaggccggcaccgccttcagcgtgttcacgccctacaaa
cgcgcctggctgaagaaggtggatgacttctacctgcgcggctatcccgtcgagaagcat
gcccatgcgctggccgcgcggcccgagcgtttccgagaggcggtgccgccgctgtccgcg
ctgggcttcgagccgaccaacctcaagcagctcggcatccccaccggcatgagcggcggc
cagcagctgtgggaagacttcttcgaccggctcgacgactacgacgacacccgcaacttc
cccgcagtcaagggcccgagctacctgggcatccacctgcgtttcggcaccgtgtcggtc
cgcgcgctggcccatgcggcctaccagcggctgcagcacggcggcagccgaaagggcgcg
gagacctggctgggcgagctgatctggcgcgacttcttcacccagatcctctaccaccag
ccgcatgtggtgggccatgcctaccgccccgaatacgacgcgctgaagtgggagcacggc
aagcaggccgacgcccacttccaggcctggtgcgagggccgcaccggctacccgctggtg
gacgccgccatggcccagatcaaccagagcggctacatgcacaaccgcctgcgcatggtg
gcggcgagtttcctggtgaaggacctcggcatcgactggcgccggggcgaggcctatttc
gccgagcacctcaacgacttcgaactctccagcaacaacggcaactggcagtgggcggcc
tccaccggctgcgatgcccagccctggttccgcatcttcaacccggtgacgcagagccgg
cgcttcgatccgcacggcaagttcatccggcgttacctgccgcagctggcgcgcctgtcg
gacgacgagatccacgcgccctggaccgccacgccggtcgagctggaagccgccggcctg
gtgctgggccgcgactatcccgagcccatcgtggaccacgagacggcgcggcagaaaacc
ctggcgcgttattcggcggcgcggccgccgaagtag
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