Xylophilus rhododendri: GT347_10615
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Entry
GT347_10615 CDS
T06383
Symbol
ruvB
Name
(GenBank) Holliday junction branch migration DNA helicase RuvB
KO
K03551
holliday junction DNA helicase RuvB [EC:
5.6.2.4
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
GT347_10615 (ruvB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_10615 (ruvB)
Enzymes [BR:
xyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT347_10615 (ruvB)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
GT347_10615 (ruvB)
RecFOR pathway proteins
GT347_10615 (ruvB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RuvB_N
AAA_lid_4
RuvB_C
AAA
AAA_5
Mg_chelatase
TIP49
AAA_16
nSTAND3
AAA_14
AAA_22
AAA_3
Rad17
NTPase_1
AAA_18
DUF815
RNA_helicase
TsaE
AAA_33
AAA_17
ABC_tran
Sigma54_activ_2
AAA_28
NB-ARC
AAA_24
Motif
Other DBs
NCBI-ProteinID:
QHI98406
UniProt:
A0A857J3R4
LinkDB
All DBs
Position
complement(2296784..2297848)
Genome browser
AA seq
354 aa
AA seq
DB search
MTIHTDDFAPPPGPSPARVISASPASPQEEAIERALRPKLLDEYIGQAKAREQLEIFIGA
ARKRDEALDHVLLFGPPGLGKTTLSHIIAAELGVNLRQTSGPVLEKPKDLAALLTNLEKN
DVLFIDEIHRLSPVVEEILYPALEDYQIDIMIGEGPAARSIKLDLQPFTLVGATTRAGML
TNPLRDRFGIVARLEFYTPEELARIVKRSAGLLNVPIDEEGAFEIARRSRGTPRISNRLL
RRVRDYADVKGDGRITLPIADRALKMLDVDPQGFDVMDRKLLEALIHRFDGGPVGLDNIA
ASIGEEAGTIEDVIEPYLIQQGFLQRTPRGRIATLAAYRHLQVTPPSRGADLFS
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atgaccatccacaccgacgatttcgccccgccgcccggcccctcgcccgcccgggtgata
tcggcttcgcccgcatcgccccaggaagaggcgatcgagcgggcgctgcgccccaagctg
ctcgacgaatacatcggccaggccaaggcgcgcgagcagctggagatcttcatcggcgcc
gcgcgcaaacgcgacgaggcgctggaccatgtgctgctcttcggcccgcccggcctgggc
aagaccacgctgagccacatcatcgccgccgagctgggcgtgaacctgcgccagaccagc
ggcccggtgctggaaaaacccaaggacctggccgcgctgctgaccaatctcgagaagaac
gacgtgctcttcatcgacgagatccaccgcctgagcccggtggtggaggaaatcctctat
ccggcgctggaggactaccagatcgacatcatgatcggcgaaggcccggccgcgcgcagc
atcaagctcgacctgcagcccttcacgctcgtcggcgccaccacccgcgccggcatgctg
accaacccgctgcgcgaccgcttcggcatcgtggcgcggctggagttctatacgcccgag
gagctggcgcgcatcgtcaaacgcagcgccgggctgctcaacgtgccgatcgacgaggag
ggcgccttcgagatcgcccgccgctcgcgcggcacgccgcgcatctccaaccgcctcttg
cgccgggtgcgcgactacgccgatgtgaagggcgacggccgcatcaccctgccgatcgcc
gaccgggcgctgaagatgctggacgtggatccgcaaggcttcgacgtgatggaccgcaag
ctgctcgaagcgctgatccaccgcttcgacggcgggccggtggggctggacaacatcgcc
gcctccatcggcgaggaggccggcaccatcgaggacgtgatcgagccctatctgatccag
cagggctttctgcagcgcacgccgcgtggccgcatcgcgaccctggcggcctaccggcat
ttgcaggtgacgccgccttcacggggcgccgacctgttctcctag
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