Xylophilus rhododendri: GT347_11825
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Entry
GT347_11825 CDS
T06383
Symbol
rsmB
Name
(GenBank) 16S rRNA (cytosine(967)-C(5))-methyltransferase RsmB
KO
K03500
16S rRNA (cytosine967-C5)-methyltransferase [EC:
2.1.1.176
]
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xyk03009
]
GT347_11825 (rsmB)
Enzymes [BR:
xyk01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.176 16S rRNA (cytosine967-C5)-methyltransferase
GT347_11825 (rsmB)
Ribosome biogenesis [BR:
xyk03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
GT347_11825 (rsmB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Methyltr_RsmB-F
RsmF-B_ferredox
NusB
FtsJ
Methyltransf_31
Methyltransf_25
Methyltransf_12
DUF8755
Cons_hypoth95
Methyltransf_15
Methyltr_RsmF_N
Motif
Other DBs
NCBI-ProteinID:
QHI98625
UniProt:
A0A857J739
LinkDB
All DBs
Position
complement(2551785..2553173)
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AA seq
462 aa
AA seq
DB search
MNLSSSVSSSPSSPSHSNSPELWLQLQHAAEVLAAIRSGRSAPTALETVPQGLRPGVRAL
VFQVLRVLGRAEALRRKLATRTPPPLADALLCTALALAWRSADAPYEPFTLVDQAVEAAK
RTPAIRPQSGFINACLRRFLREQDALVAATDPEPLAMWNHPRWWIERLKRDHPRHWQEIL
RADNSHAPMTLRVNRLKTSREAALRRMEAANLVAHPVGDWGIVMGHPLPVEQIPGFTEGE
LSVQDAAAQMAAPLLLHGLDLRQPLRVLDACAAPGGKTAHLIEFAGERSPIMVTALDIDP
QRCERIHQTLDRLGIADRAQVLAADAQEPARWWPQQGREQYDAILLDAPCTASGIVRRQP
DVRWLRRESDIAQLAIIQAGLLTRLWPLLKPGGRLLYCTCSVFREEGEHQIEAFLAHNTD
AVLRPSPGHLLPRDAAMAMGVADNLAGDHDGFFYALLHKRGA
NT seq
1389 nt
NT seq
+upstream
nt +downstream
nt
atgaacctgtcttcctccgtgtcatcttctccttcgtctccgtcgcattccaactcgcct
gaactgtggctgcagctgcagcatgccgccgaagtcctggccgcgatccgcagcggccgc
tccgcaccgaccgccctcgaaaccgtgccgcagggcctgcgcccgggcgtgcgcgccctg
gtgtttcaggtgctgcgggtgctgggccgggccgaggccctgcgccgcaagctggccacc
cgcacgccgccgccgctggccgatgcgctgctgtgcaccgcgctggccctggcctggcgc
agcgccgatgcgccttacgagcccttcaccctggtcgaccaggcggtggaggcggccaaa
cgcacgccggccatccgcccgcagtccggtttcatcaacgcctgcctgcggcgtttcctg
cgcgagcaggatgccctggtggccgccaccgatcccgagccgctggccatgtggaaccat
ccgcgctggtggatcgagcggctgaagcgcgaccatccccgccactggcaggagatcctg
cgcgccgacaactcccatgcgccgatgaccctgcgggtcaaccgcctgaagaccagccgc
gaggccgcgctgcgccgcatggaggccgccaacctggtcgcccatccggtcggcgactgg
ggcatcgtcatgggccatccgctgccggtcgagcagatcccgggcttcacggaaggcgaa
ctctcggtgcaggacgccgccgcccagatggccgcgccgctgctgctgcacggcctggac
ctgcgccagcccctgcgggtgctcgacgcctgcgccgcccccggcggcaagacggcccac
ctgatcgaattcgcaggcgagcgctcgcccatcatggtcaccgcgctggacatcgacccc
cagcgctgcgaacgcatccaccagaccctggaccgcctgggcatcgccgaccgcgcccag
gtgctggcggcggacgcccaggagcccgcgcgctggtggccccagcagggccgcgagcaa
tacgacgccatcctgctcgacgcaccctgcaccgcctccggcatcgtgcgccgccagccg
gacgtgcgctggctgcggcgcgagagcgacatcgcccagctggccatcatccaggccggc
ctgctgacgcggctgtggcccttgctcaagcccggcggccgcctgctctactgcacctgt
tcggtgttccgggaggagggcgagcaccagatcgaagcgtttcttgcgcacaacaccgat
gcggttttacgtccgtcgcccggtcatttgctgccgcgcgacgcggccatggcaatgggt
gtcgccgacaatctcgccggtgaccatgacggcttcttctacgccctgctccacaagcgc
ggtgcctga
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