KEGG   Xylophilus rhododendri: GT347_12295
Entry
GT347_12295       CDS       T06383                                 
Name
(GenBank) AMP-binding protein
  KO
K01897  long-chain-fatty-acid---CoA ligase [EC:6.2.1.3]
Organism
xyk  Xylophilus rhododendri
Pathway
xyk00061  Fatty acid biosynthesis
xyk00071  Fatty acid degradation
xyk01100  Metabolic pathways
xyk01212  Fatty acid metabolism
xyk02024  Quorum sensing
xyk04146  Peroxisome
Module
xyk_M00086  beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:xyk00001]
 09100 Metabolism
  09103 Lipid metabolism
   00061 Fatty acid biosynthesis
    GT347_12295
   00071 Fatty acid degradation
    GT347_12295
 09140 Cellular Processes
  09141 Transport and catabolism
   04146 Peroxisome
    GT347_12295
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    GT347_12295
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01004 Lipid biosynthesis proteins [BR:xyk01004]
    GT347_12295
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:xyk04147]
    GT347_12295
Enzymes [BR:xyk01000]
 6. Ligases
  6.2  Forming carbon-sulfur bonds
   6.2.1  Acid-thiol ligases
    6.2.1.3  long-chain-fatty-acid---CoA ligase
     GT347_12295
Lipid biosynthesis proteins [BR:xyk01004]
 Acyl-CoA ligase
  Long/very long chain acyl-CoA ligase
   GT347_12295
Exosome [BR:xyk04147]
 Exosomal proteins
  Exosomal proteins of breast milk
   GT347_12295
  Exosomal proteins of breast cancer cells
   GT347_12295
SSDB
Motif
Pfam: AMP-binding AMP-binding_C AMP-binding_C_2 DUF4235 AMP-binding_C_3
Other DBs
NCBI-ProteinID: QHI98702
UniProt: A0A857J6R2
LinkDB
Position
complement(2649091..2650767)
AA seq 558 aa
MEKIWLDAYPPGVPADIDTSAYRSLAELIDQGFREHADKVAYTFMGEQVRFADTDRDSRR
IAAWLQSLGLSRGDRVALMMPNMPQYPAAVAAVIRAGCVVVNVNPLYTARELEHQLRDSG
AKAIFVLENFAHTLQKCLARTAIEHIVLCATGDRLGWLKGTLVNLAVRHLKKMVPAFELP
KALRFNEVLARGGRLAFRAPELGPDDLALLQYTGGTTGVAKGAMLLHRNVTANVLQSEAW
HAPATSKVPGGEQHTFVCALPLYHIFAFTVIMMLALRTGSKCILVPNPRDLKATLKTLSQ
QRFHVFPAVGTLFAGLANHADFGTVDWSGLRLTVAGGAAVSTAVTELWEQKTGSKIREGY
GLSETSPSAACNPTAGDGVVRGSIGIPLPSTEFALLDDDGHEVAMGEPGEIAIRGPQVMA
GYWQRPEDTAKVMTSDGFMRTGDIATVDERGFFRIVDRKKDMILVSGFNVYPNEIENVVA
SMPGVAECAVVGVPDDKTGEAVKLVVVRRDAGVSEQQVRAYCQENLTGYKRPRVVEFRDQ
LPKTPIGKVLRRELRDKA
NT seq 1677 nt   +upstreamnt  +downstreamnt
atggaaaaaatctggctcgatgcctatccgcccggcgtgcctgccgacatcgacacctcc
gcctaccgttcgctggccgagctgatcgaccagggctttcgtgaacacgccgacaaggtg
gcctacaccttcatgggcgagcaggtgcggttcgcggacaccgaccgggacagccgccgc
atcgccgcctggctgcagtcgctcggcctttccaggggcgaccgggtggcgctgatgatg
cccaacatgccgcagtacccggccgccgtggccgcggtgatccgcgcgggctgcgtggtg
gtgaacgtcaatccgctctacaccgcgcgggagctggaacaccagctgcgcgactcgggc
gccaaggcgatcttcgtgctggagaacttcgcccacacgctgcagaagtgcctggccagg
accgccatcgaacatatcgtgctgtgcgccaccggcgatcggctgggctggctgaagggc
acgctggtcaatctggcggtgcggcatctcaagaagatggtgccggccttcgagctgccc
aaggccctgcgcttcaacgaggtgctggcgcggggcgggcgcctggccttccgcgcgccg
gaactggggccggacgacctcgcgctgctgcagtacaccggcggcaccaccggcgtcgcc
aagggcgcgatgctgctgcaccgcaatgtcaccgccaatgtgctgcagtccgaggcctgg
catgcgccggccaccagcaaggtgccgggcggcgagcagcacaccttcgtctgcgcgctg
ccgctgtatcacatcttcgccttcaccgtgatcatgatgctggcgctgcgcaccggcagc
aaatgcatcctggtgcccaatccgcgcgatctgaaggccacgctgaagacgctgtcgcag
cagcgtttccacgtctttccggcggtcggcaccttgttcgccgggctggcgaaccatgcc
gatttcggcacggtcgactggagcggcctgcgcctgaccgtggccggtggcgcggcggtg
tccaccgcggtcaccgagctctgggagcagaagaccggctcgaagatccgcgaaggctat
ggcctgtcggagacctcgccctcggcggcctgcaatcccacggccggggacggcgtggtg
cgcggcagcatcggcattccgctgccgtccaccgaattcgcgctgctcgacgacgacggc
cacgaggtggccatgggcgaacccggcgagatcgcgatccgcgggccgcaggtgatggcc
ggctactggcagcggccggaagacacggccaaggtgatgacatccgatggcttcatgcgc
accggcgacatcgccacggtggacgagcgcggcttcttccgcatcgtcgaccgcaagaag
gacatgatcctggtgagcggcttcaacgtctatcccaacgagatcgagaacgtggtggcc
agcatgcccggcgtggccgaatgcgcggtggtgggtgtgcccgacgacaagaccggcgag
gccgtcaagctggtggtggtgcgccgcgatgcaggcgtgagcgagcagcaggtgcgtgcc
tattgccaggagaacctcaccggctacaagcgcccgcgggtggtggaattccgcgatcag
ctgcccaagacgccgatcggcaaggtgctgcggcgcgaactgcgggacaaggcctga

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