Xylophilus rhododendri: GT347_12485
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Entry
GT347_12485 CDS
T06383
Symbol
ssb
Name
(GenBank) single-stranded DNA-binding protein
KO
K03111
single-strand DNA-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03030
DNA replication
xyk03430
Mismatch repair
xyk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
GT347_12485 (ssb)
03430 Mismatch repair
GT347_12485 (ssb)
03440 Homologous recombination
GT347_12485 (ssb)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xyk03032
]
GT347_12485 (ssb)
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_12485 (ssb)
03029 Mitochondrial biogenesis [BR:
xyk03029
]
GT347_12485 (ssb)
DNA replication proteins [BR:
xyk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GT347_12485 (ssb)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Other MMR factors
GT347_12485 (ssb)
TLS (translesion DNA synthesis) factors
Other SOS response factors
GT347_12485 (ssb)
Mitochondrial biogenesis [BR:
xyk03029
]
Mitochondrial DNA transcription, translation, and replication factors
Mitochondrial DNA replication factors
Other Mitochondrial DNA replication factors
GT347_12485 (ssb)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SSB
tRNA_anti-codon
RhlB
DUF3138
Motif
Other DBs
NCBI-ProteinID:
QHI98737
UniProt:
A0A857J4X2
LinkDB
All DBs
Position
2690646..2691206
Genome browser
AA seq
186 aa
AA seq
DB search
MASVNKVIIVGNLGRDPEMRSFPSGDQVANVTIATTDRWRDKTSGEMREATEWHRVVFNG
KLAEIAGQYLRKGSQVYVEGSLRTRKWTGQDGIEKYTTEIRADQMQMLGSRTGAGGGGGA
PQGGGYDEGAGGGYDSMPAPAPARRAPAPAGAPMAARAPAPAPRAAAPAPSRPSSGFDDM
DDDIPF
NT seq
561 nt
NT seq
+upstream
nt +downstream
nt
atggcatccgtcaacaaagtcatcatcgtcggcaacctcgggcgcgacccggaaatgcgc
tcctttcccagcggcgaccaggtggccaacgtgaccatcgccaccaccgaccgctggcgc
gacaagaccagcggcgagatgcgcgaagccaccgaatggcaccgcgtggtcttcaacggc
aagctcgccgagatcgccggccagtacctgcgcaagggctcgcaggtctacgtcgaaggc
tcgctgcgcacccgcaagtggaccggccaggacggcatcgagaaatacaccaccgagatt
cgcgccgaccagatgcagatgctcggcagccgcaccggcgccggcggcggtggcggcgca
ccgcaaggcggcggctacgacgaaggtgccggcggcggctacgacagcatgcccgcaccg
gcgcccgcacgccgcgcaccggcaccggccggcgcccccatggcggcacgcgccccggcg
cccgcaccgcgcgcggcggcaccggcgcccagccggccgtcctcgggcttcgacgacatg
gacgacgacatcccgttctaa
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