Xylophilus rhododendri: GT347_12490
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Entry
GT347_12490 CDS
T06383
Symbol
dbpA
Name
(GenBank) ATP-dependent RNA helicase DbpA
KO
K05591
ATP-dependent RNA helicase DbpA [EC:
5.6.2.6
]
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
xyk03009
]
GT347_12490 (dbpA)
Enzymes [BR:
xyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
GT347_12490 (dbpA)
Ribosome biogenesis [BR:
xyk03009
]
Prokaryotic type
rRNA helicases
GT347_12490 (dbpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
ERCC3_RAD25_C
Cas3-like_C_2
AAA_22
P-loop_SecA
NAT10_TcmA_helicase
Motif
Other DBs
NCBI-ProteinID:
QHI98738
UniProt:
A0A857J7J0
LinkDB
All DBs
Position
2691300..2692715
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AA seq
471 aa
AA seq
DB search
MNTNAATTAATSSFDQLALSPATIANLTALGYTAMTAIQAAALPPALLGKDLIAQAKTGS
GKTAAFGLALLANLNPRRFAVQSLVLCPTRELADQVTAEIRRLARAEENIKVVTLCGGVA
MRGQIASLEHGAHIVVGTPGRIMDHLERETLDLSALNTLVLDEADRMLDMGFVDDIAKVA
ARCPANRQTLLFSATYPEGIARIAARFMRDPQRIEVASQHAEARIRQLWYEVRENERLQA
VTQLLDHFRPESTLAFCNTKQQCRDLAEVLQARGFSALALYGELEQRERDQVLVQFSNRS
CSVLVATDVAARGLDIAQLEAVINVDTTPDAEVHIHRIGRTGRVGQADAEGLALNLASLN
EMGAVGRIEQLQGRESDWHQLSELTPAPGGTLVPPMATLQIIGGRKEKIRAGDVLGALTG
DCGYTREQVGRINVNDFSTYVAVDRNIAAQAVERLSAGKVKGRSVKVRVLE
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaacaccaacgccgccaccaccgccgcgacctccagcttcgaccagctggccctctcg
cccgccaccatcgccaacctcaccgccctgggctacaccgccatgacggcgatccaggcc
gccgccctgccgcccgccctgctcggcaaggacctgatcgcccaggccaagaccggcagc
ggcaagaccgccgccttcggcctggcgctgctggccaacctcaacccgcgccgcttcgcc
gtgcaatcgctggtgctctgccccacccgcgagctggccgaccaggtcaccgccgagatc
cgccgcctggcgcgcgccgaggagaacatcaaggtcgtcaccctgtgcggcggtgtcgcc
atgcgcggccagatcgccagcctggagcacggcgcccacatcgtggtcggcacgccgggc
cgcatcatggaccacctggagcgcgagacactcgacctgtccgccctcaacaccctggtg
ctggacgaggccgaccgcatgctcgacatgggcttcgtcgacgacatcgccaaggtggcc
gcccgctgccccgccaaccggcagacgctgctgttctcggccacctaccccgaaggcatc
gccaggatcgccgcccgtttcatgcgcgatccgcagcgcatcgaagtggcctcgcagcat
gccgaggcacgcatccgccagctctggtacgaggtgcgcgagaacgagcgcctgcaggcc
gtcacccagctgctcgaccatttccggccggaaagcaccctggccttctgcaacaccaag
cagcagtgccgcgacctggccgaggtgctgcaggcgcgcggcttctcggccctggcgctg
tacggcgagctggaacagcgcgagcgcgaccaggtgctggtgcagttctccaaccgcagc
tgctcggtgctggtggccaccgacgtggccgcgcgcggcctggacatcgcccagctcgaa
gccgtcatcaacgtggacaccacgccggacgccgaagtgcacatccaccgcatcggccgc
accggccgcgtcggccaggccgatgccgagggcctggcgctgaacctggccagcctcaac
gagatgggcgccgtcggccgcatcgagcagctgcagggccgcgagtcggactggcaccaa
ctcagcgagctcacccccgcccccggcggcaccctggtgccgcccatggccaccctgcag
atcatcggcggccgcaaggaaaagatccgcgccggcgacgtgctgggcgcgctcaccggc
gactgcggctacacccgcgagcaggtcgggcgcatcaacgtcaacgatttctccacctat
gtggcggtggatcggaacatcgccgcgcaggcggtggagcggctgtcggccggcaaggtc
aaaggacgcagtgtgaaggtgcgtgttctggaataa
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