Xylophilus rhododendri: GT347_14330
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Entry
GT347_14330 CDS
T06383
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk00550
Peptidoglycan biosynthesis
xyk01100
Metabolic pathways
xyk01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
GT347_14330 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
GT347_14330 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
xyk01011
]
GT347_14330 (mrdA)
Enzymes [BR:
xyk01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
GT347_14330 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
xyk01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
GT347_14330 (mrdA)
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Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
QHI99058
UniProt:
A0A857J8F6
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All DBs
Position
3118632..3120572
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AA seq
646 aa
AA seq
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MTEIRSTEMELARFKRRILAVALLMLFCFGLLCSRLVYLQIVRHEDLAEQAESNRTAVVP
IVPNRGLILDRNGNVLATNYSAYTLEITPSKAGDVEDTIARLGGLMEITPRDRRRFKKLT
EESRNFESVPIRTRLSDTEVAKFAAQSFKFPGVEIKARLFRTYPFGELASHVIGYIGRIN
QREKERIEDSDDSSNYRGTDHIGKLGVEQSFERQLHGTTGVEQMETSAGGRAVRRLATYA
AMPGQTVQLSIDIKLQQLVEELFGDRRGALVAIEPSTGEILAFVSKPTFDPNLFVDGIDQ
ESWSALNDSIDKPLLNRALRGTYPTGSTYKPFMGLAGLETGKRTAGTVINDPGFYMFAGH
RFGSPEGYLGGVDLQRAIMLSSNVYFYSLANELGVDAIHDFMAPLGFGQITGIDLPGEVT
GVLPSTDWKRRTYKRPEQRKWYAGETISLGIGQGYNNFTMLQVAQATSILADGGIKHRPH
LVRAVRDPVTGVTTPVEQPAPVNLGFKRSNIDAVRAGLIAVTTGGTARGVFAGAPYVSAG
KTGTAQAVTQAQNTKYNARALEEHQRDHALYMAFGPAQDPKIALAVIVENAGWGTGAAAP
IARRVLDYWLAGIYPSEEDIAATRIGKSAAPIGTPRKVEDIALPQP
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaaatccgcagcaccgaaatggaactggcgcgcttcaagcgccggatcctggcc
gtcgcgctgctgatgctgttctgcttcggcctgctgtgcagccgcctggtctacctgcag
atcgtgcgccacgaggacctggccgagcaggccgaaagcaatcgcacggcggtggtgccc
atcgtgcccaaccgcggcctgatcctcgaccgcaacggcaacgtgctggccaccaactat
tcggcctacaccctggagatcacgccgtcgaaggcgggcgacgtggaagacaccatcgcc
cgtctgggcggcctgatggagatcaccccgcgcgaccgccgccgcttcaagaagctgacc
gaggagtcgcgcaacttcgagtcggtgccgatccgcacccgcctgtccgataccgaggtc
gccaagttcgccgcccagagcttcaagttccccggcgtggagatcaaggcccggctgttc
cgcacctatcccttcggcgagctggccagccatgtcatcggctacatcggccgcatcaac
cagcgcgagaaggagcgcatcgaggactccgacgactccagcaactaccgcggcaccgac
cacatcggcaagctgggcgtggagcagagcttcgagcgccagctgcacggcaccaccggc
gtcgagcagatggagacctcggccggcggccgggcggtgcgccggctggccacctacgcg
gccatgccggggcagacggtgcagctgtccatcgacatcaagctgcagcagctggtggag
gagctgttcggcgaccggcgcggcgcgctggtggcgatcgaaccgtccaccggcgagatc
ctggccttcgtcagcaagcccaccttcgaccccaacctcttcgtggacggcatcgaccag
gagagctggagcgcgctcaacgattccatcgacaagcccctgctcaaccgggcgctgcgc
ggcacctatcccaccggctccacctacaagcccttcatgggcctggcggggctggagacc
ggcaaacgcacggcgggcacggtgatcaacgacccgggcttctacatgttcgccggccac
cgcttcggcagccccgagggctatctgggcggggtggacctgcagcgggcgatcatgctg
tcgtccaacgtgtatttctattcgctggccaacgagctgggcgtggacgccatccacgac
ttcatggcgccgctgggcttcggccagatcaccggcatcgacctgccgggcgaagtcacc
ggcgtgctgcccagcaccgactggaaacgccgcacctacaagcggcccgagcagcgcaag
tggtatgcgggcgagacgatctcgctgggcatcggccagggctacaacaacttcaccatg
ctgcaggtggcgcaggccacgtccatcctggccgacggcggcatcaagcaccggccgcac
ctggtgcgcgcggtgcgcgatccggtcaccggcgtgaccacgccggtggagcagccggcg
ccggtgaacctgggcttcaagcggtccaacatcgacgcggtgcgcgccggcctgatcgcg
gtgaccaccggcggcaccgcgcgcggcgtgttcgcgggcgcgccctacgtgtcggccggc
aagacgggcaccgcccaggcggtgacccaggcgcagaacaccaagtacaacgcccgcgcg
ctggaggaacaccagcgcgaccacgccctctacatggccttcggtccggcgcaggacccc
aagatcgccctggccgtgatcgtggagaacgccggctggggcacgggcgcggccgcgccc
atcgcccggcgggtgctggactactggctggccggcatctaccccagcgaggaagacatc
gccgccacccgcatcggcaagagcgccgcgccgatcggcacaccgcgcaaggtcgaggac
atcgccctgccgcagccctga
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