Xylophilus rhododendri: GT347_15295
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Entry
GT347_15295 CDS
T06383
Symbol
rpoA
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
GT347_15295 (rpoA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xyk03021
]
GT347_15295 (rpoA)
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_15295 (rpoA)
Enzymes [BR:
xyk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
GT347_15295 (rpoA)
Transcription machinery [BR:
xyk03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
GT347_15295 (rpoA)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
GT347_15295 (rpoA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
QHI99223
UniProt:
A0A857J7K5
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All DBs
Position
3301647..3302639
Genome browser
AA seq
330 aa
AA seq
DB search
MQTNLLKPKAINVEQLGLNRAKVALEPFERGYGHTLGNAIRRVLLSSMVGYAATEVTIAG
VLHEYSSIDGVQEDVVNILLNLKGVVFKLHNRDEVTLSLRKDGEGVVTAGDIQTPHDVEI
INPDHVIAHLSAGGKLDMQIKVEKGRGYVPGTMRRYADESTKSIGRIVLDASFSPVKRVS
YTVESARVEQRTDLDKLVVEIETNGAISAEDAVRASAKILVEQLAVFAQLEGGELAAFDA
PAPRGGNTPFDPILLRPVDELELTVRSANCLKAENIYYIGDLIQRTENELLKTPNLGRKS
LNEIKEVLASRGLTLGMKLESWPPAGLDKR
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcaaaccaacctgctgaaacctaaagcgatcaacgtcgagcaactgggcctgaaccgg
gccaaggtcgctctggaaccgttcgagcgcggctatggccatacgctgggcaacgcgatc
cgtcgtgtgctgctgtcctcgatggtcggctacgccgccaccgaagtcacgatcgccggc
gttctgcacgagtactcctccatcgacggtgtccaggaagatgtcgtcaacatcctgctg
aacctcaagggcgtggtcttcaagctccacaaccgcgatgaagtgaccctgtccttgcgc
aaggacggcgaaggcgtcgtcaccgccggcgacatccagaccccgcacgacgtcgagatc
atcaatcccgaccacgtgatcgcccacctgtcggccggcggcaagctcgacatgcagatc
aaggtcgaaaagggccgtggttatgtgccgggcacgatgcgccgctatgcggacgaatcg
accaagtcgatcggccggatcgtcctggacgcctcgttctcgccggtcaagcgcgtcagc
tacaccgtcgaaagcgcccgcgtcgaacagcgtaccgacctggacaagctggtcgtcgag
atcgaaaccaacggtgccatctcggccgaagacgccgtgcgcgcctccgccaagatcctg
gtcgagcagctggccgtgttcgcccagctcgaaggcggcgaactggctgcattcgatgcg
ccggctccgcgcggcggcaacacgccgttcgatccgatcctgctgcgtccggtcgacgaa
ctcgaactgacggtgcgttcggccaactgcctgaaggccgaaaatatctactacatcggt
gacctgatccagcgcaccgagaacgagctgctcaagacccccaacctgggtcgcaagtcg
ctcaacgaaatcaaggaagtgctggcctcgcgcggcctgaccctgggcatgaagctggaa
agctggccgcccgcaggtctggacaagcgctga
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