Xylophilus rhododendri: GT347_16705
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Entry
GT347_16705 CDS
T06383
Name
(GenBank) ABC transporter permease subunit
KO
K02053
putative spermidine/putrescine transport system permease protein
K02054
putative spermidine/putrescine transport system permease protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_16705
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_16705
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GT347_16705
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BPD_transp_1
DUF4064
Motif
Other DBs
NCBI-ProteinID:
QHI99473
UniProt:
A0A857J8D2
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Position
3600829..3602532
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AA seq
567 aa
AA seq
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MNSTAIPLPPGAALHAAPRRRWNRAAVLAAAPLLVFLLLFFVGPIAGLMKEGFLVDGQLS
LSHYRHLLDTPIYRIVLGNTFTIAVAVTISCVVMSYPLAYLMASVSPRIARILFFAVLLP
FWSSALVRTSAWIALLGKNGPLNALLTGTGIASEPVAFLFNFTGVMIGTTHVLMPFVLLP
LYASFKAMDRTLVQAAQSLGAGSVSIFSKVVLPLTSPGVVAGGIIVFMNAVGYYITPSLM
GGPGQRMVAEVISHNITEELNWGVAAALAGVLLVTVLVSLWVFNRLFGLDKLISGSGGKG
SSEAPARRTPGGRFSVVAGILSVLFLLAPIVVVIPMSFGTSQYPSFPPPEYGLRWYRSFL
EEDKWLAALFSSLKVGLIVTLLASVLGIAAALGVHKMKSGAGKVLDALFVIPMSVPSIIT
GVSLYYMTAPLGWVANSVAVILGHTVLAAPYVYITVRAALRSFDHSLELAAMGLGASWTV
MFRLVMLPALLPGLIGAAVFAFVTSFDDVVMALFLTNVRNRTLPKLMFEGLSSDFDPTVI
SASCLLVAATALILIAQQLLGRKKNGA
NT seq
1704 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaccgccattcccctgccgcccggcgcggccctccacgccgcgccgcggcgc
cgctggaaccgcgcggcggtgctggcggcggcgccgctgctggtgttcctgctgctcttc
ttcgtcgggccgatcgccggcctgatgaaggagggtttcctggtggacgggcagttgagc
ctgtcccactaccgccacctgctcgatacgcccatctaccgcatcgtgctgggcaatacc
ttcaccatcgcggtggcagtcaccatcagctgcgtggtgatgagctaccccctggcctac
ctgatggccagcgtcagcccgcgcatcgcgcgcatcctcttcttcgcggtgctgctgccc
ttctggtcgagcgcgctggtgcgcacctcggcctggatcgccctgctgggcaagaacggc
ccgctcaacgctttgctcaccggcaccggcatcgcgtccgagccggtggccttcctcttc
aatttcaccggcgtgatgatcggcaccacccatgtgctgatgcccttcgtgctgctgccg
ctctacgcctccttcaaggccatggaccgcacgctggtacaggccgcgcagagcctgggc
gccggctcggtctcgatcttctccaaggtggtgctgccgctgaccagtccgggtgtggtg
gccggcggcatcatcgtcttcatgaacgcggtgggctactacatcacgccctcgctgatg
ggcgggccgggccagcgcatggtggccgaggtcatctcgcacaacatcaccgaggaactc
aactggggcgtggccgcggcgcttgccggcgtgctgctggtgacggtgctggtctcgctg
tgggtgttcaaccgcctgttcgggctggacaagctcatcagcggctccggcggcaagggc
agcagcgaggcgccggcacggcgcacgccgggcgggcgtttctcggtggtggccggcatc
ctcagcgtgcttttcctgctggcgcccatcgtggtggtgataccgatgagtttcggcacc
tcgcagtacccgagctttccgccgccggaatacggcctgcgctggtaccgcagcttcctg
gaggaggacaagtggctggccgccctgttctccagcctgaaggtgggcctgatcgtgacc
ctgctggccagcgtgctcggcatcgccgccgcgctcggcgtgcacaagatgaagtcgggc
gccggcaaggtgctcgatgcgctcttcgtcatccccatgtcggtgccttccatcatcacc
ggcgtgtcgctgtactacatgaccgcgccgctgggctgggtggccaattcggtggcggtg
atcctgggccacacggtgctggccgcgccctatgtctacatcaccgtgcgggccgcgctg
cgcagcttcgaccacagcctggagctggcggccatgggcctgggcgcgagctggacagtg
atgttccgcctggtcatgctgccggccctgctgccggggctgatcggcgcggccgtcttc
gccttcgtcacctccttcgacgacgtggtgatggcgctcttcctcaccaacgtgcgcaac
cgcacgctgcccaagctgatgttcgaaggcctgtccagcgacttcgatcccacggtgatc
tcggcctcctgcctgctggtggccgccaccgccctcatcctgatcgcccagcagctgctc
ggccgcaagaaaaacggagcctga
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