Xylophilus rhododendri: GT347_18085
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Entry
GT347_18085 CDS
T06383
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_18085
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_18085
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GT347_18085
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
AAA
AAA_22
Rad17
SMC_N
nSTAND_NTPase5
AAA_28
AAA_16
RsgA_GTPase
NACHT
AAA_25
ORC-CDC6-like
ATPase_2
IstB_IS21
AAA_14
AAA_5
AAA_29
AAA_30
AAA_18
TsaE
MobB
nSTAND3
NB-ARC
PduV-EutP
Motif
Other DBs
NCBI-ProteinID:
QHI99717
UniProt:
A0A857J7N0
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All DBs
Position
3910024..3911070
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AA seq
348 aa
AA seq
DB search
MTPDPQLFRTRIGVENCAKTYADGTRGLQPTSLQVEPGEVLALLGPSGCGKTTLLRLLAG
LEAADAGSRILFDQQDVTDRPAERRGVGMVFQSYALFPQMTVAANIGYGLRVRGVAAQEI
RQRVGELVDLVRLSGLEHRRPAELSGGQRQRVALARAVATRPRVLLLDEPLAALDAQLKE
TLRDELAELLRRLGITAVHVTHDQQEAFAIADRLAVMQGGAIVQVGDGESLYRNPAHPFV
AEFLGRVNRLRADAGGDVPLGGVLLAQNAPHGLLVRPEDVELTAPLAGRSLARVAHRSFL
GDRLRLRLEAEGQAALLADVPRDSPWCVGEAVGIRIASDRLLPAAAPR
NT seq
1047 nt
NT seq
+upstream
nt +downstream
nt
atgaccccggatccccaactgttccgcacccgcatcggtgtggagaactgcgccaagacc
tatgccgacggcacccgcggcctgcagcccaccagcctgcaggtggagcccggcgaggtg
ctggccctgctcggcccctcgggctgcggcaagaccacgctgctgcggctgctggccggg
cttgaggcggccgatgccggcagccgcatcctcttcgaccagcaggacgtcaccgaccgc
ccggccgagcgccgcggcgtcggcatggtgttccagagctacgcgctgttcccgcagatg
acggtggcggccaacatcggctatggcctcagggtgcgcggcgtggcggcgcaggagatc
cgccagcgggtcggcgaactggtcgacctggtgcgcctctccggtctggagcaccgccgg
ccggccgagctctccggcggccagcgccagcgggtggccctggcccgcgcggtggccacc
cggccgcgggtgctgctgctcgacgagccattggccgcgctcgatgcccagctcaaggaa
accctgcgcgacgaactcgccgagctgctgcggcgcctgggcatcaccgccgtgcatgtc
acccacgaccagcaggaggccttcgccatcgccgaccggctggcggtgatgcagggcggc
gccatcgtgcaggtgggcgatggcgaatcgctctaccgcaaccccgcccatcccttcgtc
gccgaattcctcggccgggtcaaccgcctgcgggccgatgccggcggcgacgtgccgctg
ggcggcgtgctgctggcgcagaacgcgccgcacggcctgctggtgcggccggaggatgtg
gagctcaccgcgccgctggccggccgttcgctggcccgggtggcgcaccgcagtttcctc
ggcgaccggctgcgcctgcggctggaggccgaaggccaggctgcgctgctggccgatgtg
ccgcgcgacagcccctggtgcgtgggcgaggcggtgggcatccgcatcgccagcgacagg
ctgctgcccgcggcggcgccgcggtga
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