Xylophilus rhododendri: GT347_18695
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Entry
GT347_18695 CDS
T06383
Symbol
miaB
Name
(GenBank) tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
KO
K06168
tRNA-2-methylthio-N6-dimethylallyladenosine synthase [EC:
2.8.4.3
]
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
xyk03016
]
GT347_18695 (miaB)
Enzymes [BR:
xyk01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.3 tRNA-2-methylthio-N6-dimethylallyladenosine synthase
GT347_18695 (miaB)
Transfer RNA biogenesis [BR:
xyk03016
]
Prokaryotic type
tRNA modification factors
Methylthiotransferases
GT347_18695 (miaB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UPF0004
Radical_SAM
TRAM
TRAM_2
DUF6802
Motif
Other DBs
NCBI-ProteinID:
QHI99830
UniProt:
A0A857J738
LinkDB
All DBs
Position
complement(4055796..4057148)
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AA seq
450 aa
AA seq
DB search
MASKKVFIKTFGCQMNEYDSDKMADVLGAAQGYEPTQDIDAADLILFNTCSVREKAQEKV
FSDLGRVKHLKARGVKIGVGGCVASQEGAAIIARAPYVDVVFGPQTLHRLPEMLAARDRL
DKPQVDISFPEIEKFDHLPPARVEGATAFVSIMEGCSKYCSYCVVPYTRGDEVSRPLDDV
LVEVATLADQGVREVTLLGQNVNAYRGAMGDTAEIADFALLLEYVAEIPGIARIRYTTSH
PNEFTQRLIEAYDKVPQLVSHLHLPVQHGSDRILMAMKRGYTAMEYKSTVRKLRALRPEL
SLSSDFIVGFPGETEEDFQKMMKLIRDLRFDNSFSFIFSPRPGTPAANLADDTPQSEKLR
RLQELQAVIDEHTREIGSSRVGTVQRILVEGPSKKSSAEAPELMGRTECNRVVNFQGPAR
LVGQMVDVKVTEILGYSLRGSVVTAEPVAA
NT seq
1353 nt
NT seq
+upstream
nt +downstream
nt
atggcctccaaaaaagtattcatcaagaccttcggctgccagatgaacgagtacgactcg
gacaagatggccgacgtgctgggcgccgcccagggctacgaacccacgcaggacatcgac
gccgccgacctgatcctgttcaacacctgctcggtgcgcgagaaggcgcaggagaaggtc
ttctccgacctcggccgggtcaagcacctgaaggcgcgcggcgtgaagatcggcgtgggc
ggctgcgtggccagccaggagggcgcggccatcatcgcgcgggcgccctatgtggacgtg
gtcttcggcccgcagaccctgcaccgcctgcccgagatgctggccgcgcgcgaccggctg
gacaagccgcaggtcgacatcagctttcccgagatcgagaagttcgaccacctgccgccc
gcccgggtggaaggcgcgaccgccttcgtctccatcatggaaggctgctccaagtactgc
agctactgcgtggtgccctacacccgcggcgacgaggtgagccgcccgctcgacgacgtg
ctggtggaagtggccaccctggccgaccagggcgtgcgggaagtcaccctgctcggccag
aacgtgaacgcctaccgcggcgccatgggcgacacggccgagatcgccgacttcgccctg
ctgctggaatacgtggccgagatcccgggcatcgcccgcatccgctacaccaccagccat
cccaacgagttcacccagcgcctgatcgaggcctacgacaaggtgccgcagctggtgagc
catctgcacctgccggtgcagcacggcagcgaccgcatcctgatggcgatgaagcgcggc
tacaccgccatggaatacaagagcacggtacgcaagctgcgcgccctgcggccggagctt
tcgctgagcagcgacttcatcgtgggcttccccggcgagacggaagaagacttccagaag
atgatgaagctgatccgcgacctgcgcttcgacaactccttctccttcatcttcagcccg
cgccccggtacgccggccgccaacctggccgacgacacgccgcagtccgagaagctgcgc
cggctgcaggagctgcaggcggtgatcgacgagcacacccgcgagatcggcagcagccgc
gtcggcacggtgcagcgcatcctggtcgaggggccgtcgaagaagtcgagcgccgaggcg
cccgagctgatgggccgcaccgaatgcaaccgggtcgtcaacttccaggggccggcacgg
ctggtcgggcagatggtggatgtgaaggtcaccgagatcctgggctattcgctgcgcggc
tcggtggtgacggccgagccggtcgccgcatga
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