Xylophilus rhododendri: GT347_18775
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Entry
GT347_18775 CDS
T06383
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03420
Nucleotide excision repair
xyk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT347_18775
03430 Mismatch repair
GT347_18775
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_18775
Enzymes [BR:
xyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT347_18775
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT347_18775
MMR (mismatch excision repair)
Other MMR factors
GT347_18775
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_30
AAA_12
Terminase_6N
Motif
Other DBs
NCBI-ProteinID:
QHI99844
UniProt:
A0A857J789
LinkDB
All DBs
Position
complement(4070326..4072404)
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AA seq
692 aa
AA seq
DB search
MPSPHSPVSPASTAFDSLNERQRESVFFGDGPLLIVAGAGSGKTTTLAHRVARLVLDGAD
PQRMLLLTFSRRAAVDMERRIGGVLQKVLGIAGKSGQAPSLPWAGTFHGIGSRLLREHAA
AIGLEDNFTIHDRGDAEDLMGIVRHTLGFSSTAKRFPMKGTCLGIYSRCVNTRMPLEQVL
REAYPWCAEWEAELKQLFGAYVDAKQQQNTVDYDDLLLFWADMAADPAIGPLLAERFDHV
LVDEYQDTNRLQATILLGLKPEGRGLTVVGDDAQAIYSFRGATVRNILDFPAQFEPPATV
IALERNYRSTQPILQVSNAVIARAAERHAKRLWTDKASTRRSELVVVPDEMQQARWVAER
TLSLREGGLRLTSQAVLFRTASHSAALELELARRNIPFVKFGGLKFLEAAHVKDLLAVLR
FVQNPRSRLAGFRVLQLMPGLGAATAGRLLDAMEASPDPAGVIAGFRPKPSLAGDWQAFA
TLYAALRDAQQSSWPGDAERALAWYVPHLERIHEDAETRRADLEQLVRLAAGHGSRERFL
AELTLDPPESTSDKSGVPLLDEDYLILSTIHSAKGQEWTSVSVLNVVDGCIPSDMATGDS
AEIEEERRLLYVAMTRAREHLHLVVPHRFYVTQQARNGDRHMYAARSRFIDERAVLDFDQ
VFWPPPAAGTAGPRVAARMEVGVRQRSRDAWK
NT seq
2079 nt
NT seq
+upstream
nt +downstream
nt
atgccctcaccccattcaccggtctccccggcctccaccgccttcgattccctcaacgag
cgccagcgcgagtccgtcttcttcggcgacggcccgctgctgatcgtggccggcgccggc
tccggcaagaccaccaccctcgcccaccgcgtggcccggctggtgctcgatggcgccgat
ccgcagcgcatgctgctgctgaccttctcgcgccgcgccgccgtcgatatggagcggcgt
atcggcggagtgctgcagaaggtgctgggcatcgcaggcaagagcggccaggcgccctcg
ctgccctgggccggcaccttccacggcataggctcgcggctgctgcgcgagcatgcggcg
gccatcggactggaggacaacttcaccatccacgaccgcggcgacgccgaggacctgatg
ggcatcgtgcgccacacactgggcttttccagcacggccaaacgtttcccgatgaagggc
acctgtctcggcatctactcccgctgcgtcaacacccgcatgccgctggagcaggtgctg
cgcgaggcctatccctggtgcgccgaatgggaggccgagcttaagcagctcttcggcgcc
tatgtggacgccaagcagcagcagaacaccgtcgattacgacgacctgctgctcttctgg
gccgacatggccgccgaccccgccatcggcccgctgctggccgagcgcttcgaccatgtg
ctggtcgacgaataccaggacaccaaccggctgcaggccaccatcctgctcggcctgaag
cccgagggccggggcctgacggtggtgggcgacgacgcccaggccatctattccttccgc
ggcgccacggtgcgcaacatcctggactttcccgcgcagttcgagccgcccgccaccgtc
atcgcgctggagcgcaactaccgctccacccagcccatcctgcaggtgagcaatgccgtc
atcgcccgcgccgcagagcgccatgccaagcgcctgtggaccgacaaggcctccacccgg
cgcagcgaactggtggtggtgcccgacgagatgcagcaggcgcgttgggtggccgagcgc
accctgtcgctgcgcgaaggcgggctgcggctgacctcgcaggcggtgctgttccgcacc
gccagccacagcgccgcgctggagctggaactggcccggcgcaacatccccttcgtgaag
ttcggcggcctcaaattcctggaagccgcccacgtcaaggacctgctggccgtgctgcgt
ttcgtgcagaacccgcgcagccggctggccggattccgggtgctgcagctgatgccgggc
ctgggcgcggccaccgccggccggctgctcgatgcgatggaggccagtcccgatccggcc
ggcgtgatcgcaggcttccggcccaagccctcgctggctggcgactggcaggccttcgcc
acgctctacgccgccctgcgcgatgcgcagcagtccagctggccgggcgatgccgaacgg
gcgctggcctggtatgtgccgcacctggagcgcatccacgaggatgccgaaacccgccgg
gccgatctggaacagctggtgcgcctcgcggccggccatggctcgcgcgaacgtttcctg
gccgaactgacgctggacccgccggaatccaccagcgacaagtccggcgtgccgctgctg
gacgaggactacctgatcctttccaccatccattcggccaagggccaggaatggacctcg
gtgtcggtgctcaacgtggtggacggctgcatcccgtccgacatggcgaccggcgacagc
gccgagatcgaggaagagcgccgcctgctctacgtggccatgacccgcgcccgcgagcat
ctgcacctggtggtgccgcaccgcttctacgtcacccagcaggcccgcaacggcgaccgc
cacatgtatgccgcgcgcagccgcttcatcgacgagcgggcggtgctcgatttcgaccag
gtgttctggccgccgccggccgccggcacggccggcccgcgggtggccgcacgcatggag
gtgggcgtgcgccagcgctcgcgcgacgcatggaagtga
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