Xylophilus rhododendri: GT347_19385
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Entry
GT347_19385 CDS
T06383
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xyk03032
]
GT347_19385
03036 Chromosome and associated proteins [BR:
xyk03036
]
GT347_19385
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_19385
DNA replication proteins [BR:
xyk03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
GT347_19385
Chromosome and associated proteins [BR:
xyk03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
GT347_19385
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
GT347_19385
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
NPFF
DUF2267
HU-CCDC81_euk_2
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QHI99951
UniProt:
A0A857J9Z5
LinkDB
All DBs
Position
complement(4205766..4206083)
Genome browser
AA seq
105 aa
AA seq
DB search
MTRSDLVEELAARFAQLTHRDAETAVKTVLDAVADALVRGHRIEIRGFGSFTVNHRPPRM
GRNPRSGESVAIPEKRVPHFKPGKALREAVDARTTALKAGPATDA
NT seq
318 nt
NT seq
+upstream
nt +downstream
nt
atgacccgctccgacctcgtcgaggaactcgccgcccgcttcgcccagctcacccaccgg
gacgccgaaaccgccgtcaagaccgtgctggatgccgtggcggacgccctggtgcgcggc
caccgcatcgagatccgcggcttcggcagcttcaccgtcaaccaccgtccgccgcgcatg
gggcgcaacccgcgcagcggcgaaagcgtggcgattcccgagaagcgggtgccgcatttc
aagcccggcaaggcgctgcgcgaagcggtggatgcacgcactaccgccctgaaggccggc
cccgccacggacgcctag
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integrated database retrieval system
