Xylophilus rhododendri: GT347_19890
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Entry
GT347_19890 CDS
T06383
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_19890
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_19890
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
GT347_19890
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
PD40
Motif
Other DBs
NCBI-ProteinID:
QHJ00046
UniProt:
A0A857JBF7
LinkDB
All DBs
Position
complement(4314921..4316534)
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AA seq
537 aa
AA seq
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MKTQRLPLFQACAIAIAAALCSAPASAQTRAETMRFVTGGTVNTLDPTMLGTTREAFTVG
MSTYDRLVSFGKKKQGDNWVFDLDKIRGELAERWVVSPDGLKITFTLRKDAKFQDGTPVT
ADDVKWSLDRAVTAKQLGAAQLLTGSMTSADQFKVIDPATIEVTLPKPDRLALPNLATVY
PIIINSKVAKSHATPDDPWAQAWLKEHTAGSGAYSVESFKPGEQLVLKRNEAWNRSADGK
PAAFKRVIAQTIPEAATRANLVERGDADLAIDLQANDAASLATKGKVKVISTPQYNAVSF
ISFNTQMKPFDNVKVRQAIAYALPYDDMFKAALFGRGKPLFNATWKDGPPSADFPIAQPV
KLDLAKAKALLAEAGMPNGFETTFSFNLGQANVAEPMAALIKESLAKIGIKVDIQKLPDA
QMSTLINEKKAPFFTENIVAWLPSNDYFYRNFYTGNQRWNYSSLNDPKLVEIAEKARFEA
DPAKYAAYAKQLNAMAFELMPQIPIWQASQDAVMVPSLDGYVYQFHRQVDFRDVARK
NT seq
1614 nt
NT seq
+upstream
nt +downstream
nt
atgaagacccaacgactccccctcttccaggcctgtgccatcgccatcgcggccgctttg
tgcagcgctccggccagtgcgcagacccgcgccgagaccatgcgtttcgtcaccggcggc
accgtcaacacgctggacccgaccatgctcggcaccacccgcgaggccttcaccgtcggc
atgagcacctacgaccggctggtgtccttcggcaagaagaagcagggcgacaactgggtg
ttcgacctcgacaagatccgcggcgagctggccgagcgctgggtggtcagccccgacggc
ctgaagatcaccttcaccctgcgcaaggacgcgaaattccaggacggcacccccgtcacc
gccgacgatgtgaagtggtcgctggaccgcgccgtcaccgccaagcagctcggcgccgcc
cagttgctgaccggctccatgaccagcgccgaccagttcaaggtgatcgaccccgccacc
atcgaagtcaccctgcccaagcccgaccgcctggccctgcccaacctggccaccgtctat
ccgatcatcatcaactccaaagtcgccaagtcgcacgccacgccggacgacccctgggcc
caggcctggctgaaggaacacaccgccggcagcggcgcctacagcgtggagagcttcaag
cccggcgagcagctggtgctcaagcgcaacgaggcctggaaccgcagcgccgacggcaag
cccgccgccttcaagcgggtcatcgcccagaccatccccgaggccgccacccgcgccaac
ctggtcgagcgcggcgatgccgacctggccatcgacctgcaggccaacgacgccgcatcg
ctggccaccaagggcaaggtcaaggtgatctccacgccgcagtacaacgcggtgagcttc
atctccttcaacacgcagatgaagcccttcgacaacgtcaaggtgcgccaggccatcgcc
tatgccctgccctacgacgacatgttcaaggccgcgctcttcggccgcggcaagcccctg
ttcaacgccacctggaaggacggcccgcccagcgccgacttccccatcgcccagccggtc
aagctcgacctggccaaggccaaggcgctgctggccgaggccggcatgcccaacggcttc
gagacgactttcagcttcaacctcggccaggccaacgtggccgagcccatggccgcgctg
atcaaggaatcgctggccaagatcggcatcaaggtcgacatccagaagctgcccgatgcc
cagatgtccacgctgatcaacgagaagaaggcgcccttcttcaccgagaacatcgtcgcc
tggctgccgagcaacgactacttctaccgcaacttctacaccggcaaccagcgctggaac
tacagctcgctcaacgatcccaagctggtggagatcgccgagaaggcccgcttcgaagcc
gacccggccaagtacgcggcctatgccaagcagctgaacgccatggccttcgagctgatg
ccgcagatcccgatctggcaggccagccaggatgcagtgatggttccgtcgctcgacggc
tacgtctatcaattccatcgccaggtggacttccgcgacgtcgcccgcaagtaa
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