Xylophilus rhododendri: GT347_19900
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Entry
GT347_19900 CDS
T06383
Symbol
uvrC
Name
(GenBank) excinuclease ABC subunit UvrC
KO
K03703
excinuclease ABC subunit C
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT347_19900 (uvrC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_19900 (uvrC)
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT347_19900 (uvrC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrC_RNaseH_dom
UvrC_RNaseH
GIY-YIG
HHH_5
HHH
UVR
HHH_2
DUF7508
Topo-V_HhH_2_2nd
Motif
Other DBs
NCBI-ProteinID:
QHJ00048
UniProt:
A0A857J8K8
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All DBs
Position
4317909..4319861
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AA seq
650 aa
AA seq
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MSDVHSEELLAQVAALPMLPGVYRYFDAEGALLYVGKARNLKRRVANYFQKSHGATRIGH
MIARIARMETTVVRSEAEALLLENNLIKTQNPRYNIVFRDDKSYPYLKITGQPDARGAAG
VPHAQQFPRMAYYRGAVEKRHRYFGPFPSAWAVKESIQLIQKVFRLRTCEDTVFNNRTRP
CLLYQIKRCSGPCVNLVSPEAYGLDVAHAERFLRGETQEVVETLNQRMMAHAERLEFEQA
ADLRNQASALSKVMHQQTIETASDKDVDIIAVKVQGGKACVNLAMVRGGRHLGDRAYFPV
HVEDAAAIGSGAMEEETEAPVPVEQQVLEAFVAQHYTGVAVPSALVVGTPVAAELVEALS
ASIGSRISAVHNPRGQRRIWLEMAQTGADLQLARLLAEEGSQQARTRALVDALDLAIEDL
DQLRIECFDISHTAGEATQASCVVFQQHKMMNAEYRRYNIEGITGGDDYAAMRQVLTRRY
GKLAEAAKVSADPDQPSTGTARMPDLVLVDGGKGQVSMAREVFESLGLDLALIVGVEKGE
GRKVGLEELVFADGREKVYLGRDSAALMLVAQIRDEAHRFAITGMRAKRAKVRTGGSRLE
DIAGVGPKKRARLLQHFGGVRGVAAAGVEDIMRVDGISRELAEDIYRALH
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgtcagacgtgcattccgaagaactcctcgcgcaggtcgcggccctgccgatgctgccg
ggggtgtaccgctatttcgatgccgagggcgcgctgctctacgtcggcaaggcgcgcaat
ctcaagcggcgggtggccaactatttccagaagagccatggcgccacccgcatcgggcac
atgatcgcccgcatcgcgcgcatggaaacgacggtggtgcgctcggaagccgaggcgctg
ctgctcgagaacaacctgatcaagacgcagaacccgcgctacaacatcgtctttcgcgac
gacaagagctatccctacctgaagatcaccggccagcccgatgcgcgcggtgcagccggc
gtgccgcatgcccagcagttcccgcgcatggcctattaccgcggcgcggtggagaagcgc
caccgctatttcgggcccttccccagcgcctgggcggtgaaggaatcgatccagctgatc
cagaaggtgttccgcctgcgcacctgcgaggacaccgtcttcaacaaccgcacccggccc
tgcctgctctaccagatcaagcgctgctccggcccctgcgtgaacctggtctcgcccgag
gcctacggcctggacgtggcccatgccgagcgtttcctgcgcggcgagacgcaggaggtg
gtcgagactctgaaccagcgcatgatggcccacgccgagcgcctcgaattcgagcaggcg
gccgacctgcgcaaccaggcctcggcgctgtccaaggtgatgcaccagcagaccatcgag
acggcctcggacaaggacgtggacatcatcgcggtgaaggtgcagggcggcaaagcctgc
gtgaacctggccatggtgcgtggcggccggcacctgggcgaccgggcctacttcccggtg
catgtggaggatgcggccgccatcggctccggcgcgatggaagaggagaccgaggcgccg
gttccggtggagcagcaggtgctggaagccttcgtcgcccagcactacaccggggtggcc
gtgccctcggcgctggtggtgggcacgccggtggcggccgagctggtggaggcgctgtcg
gcctcgatcggttcgcgcatctcggcggtgcacaacccgcgcggccagcgccgcatctgg
ctggagatggcgcagaccggcgccgacctgcagctggcccggctgctggccgaggaaggc
tcgcagcaggcgcgcacccgggcgctggtcgatgcactcgacctggcgatcgaggacctg
gaccagctgcgcatcgaatgcttcgacatctcgcacacggccggcgaggccacgcaggcc
tcctgcgtggtgttccagcagcacaagatgatgaatgccgagtaccggcgctacaacatc
gagggcatcaccggcggcgacgactatgccgccatgcgccaggtgctgacgcggcgctac
ggcaagctggccgaggccgccaaggtttcggccgaccccgaccagcccagcaccggcacg
gcgcgcatgcccgacctggtgctggtcgacggcggcaagggccaggtctcgatggcgcgc
gaggtgttcgaatcgctggggctggacctggcgctgatcgtcggcgtggaaaagggcgag
ggccgcaaggtggggctggaggaactggtgttcgccgacggccgggagaaggtctatctg
ggccgcgattcggcggcgctgatgctggtggcgcagatccgcgacgaggcccaccgcttc
gccatcaccggcatgcgcgccaagcgcgccaaggtgcgcacgggcggcagccggctggag
gacatcgccggcgtcggccccaagaaacgcgcgcggctgctgcagcatttcggcggcgtg
cggggcgtggcggcggcgggggtggaggacatcatgcgggtcgacggcatctcgcgcgag
ctggccgaggacatctaccgggcgctgcattag
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