Xylophilus rhododendri: GT347_22660
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Entry
GT347_22660 CDS
T06383
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
xyk
Xylophilus rhododendri
Pathway
xyk03420
Nucleotide excision repair
xyk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
GT347_22660
03430 Mismatch repair
GT347_22660
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
xyk03400
]
GT347_22660
Enzymes [BR:
xyk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
GT347_22660
DNA repair and recombination proteins [BR:
xyk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
GT347_22660
MMR (mismatch excision repair)
Other MMR factors
GT347_22660
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
AAA_12
Viral_helicase1
Motif
Other DBs
NCBI-ProteinID:
QHJ00529
UniProt:
A0A857JCP3
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All DBs
Position
4890692..4893082
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AA seq
796 aa
AA seq
DB search
MFPDSSQDGLFAAQPASGPAASAPLLANLNPEQLAAVTLPAGHALILAGAGSGKTRVLTT
RIAWLLQTGQVSPGGILAVTFTNKAAKEMQARLQAMLPVNTRGMWIGTFHGLCNRLLRAH
YKLVNLPQSFQILDTQDMLSAIKRLMKEHKVDDERFPAKQVQYFISGAKEDGNRPTDIQP
RGEDDRKKVELYALYEAQCQREGVVDFGELMLRSYELLRDHAPVREHYQQRFRHILVDEF
QDTNRLQYAWLKQLAGPNASVLAVGDDDQSIYAFRGANVGNMADFVREFDVKHQIKLEQN
YRSFSNILDSANHLISHNSRRLGKNLRTDQGPGEPVRVYEATSDFAEAQWIVEEIRQLVR
DGTDRKEIACLYRSNAQSRVIETALFNAAVPYRVYGGLRFFERAEIKHALAYLRLLENPS
DDTSFLRVVNFPPRGIGARSLEQLQDAAREMGCSLHDAVSSIKGKAGTNLGAFVALVDVV
REQSQGQPLRAIIEQVLDASGLLIHYRAEREGADRVENLEELVNAAESFVSIEGFGRDAN
GMDARPSQSPASQGLDLSQPVLDQPLDEPPAFDAETGETQSPLVAFLTHAALEAGDNQAQ
AGQDAVQLMTVHASKGLEFDCVFIGGMEEGLFPHENSMSDRDGLEEERRLMYVAITRARK
RLYLSHSQTRMLHGQTRYHVKSRFFEELPENTLKWITPKQSAFGAYAPRAGAGGSGSGWG
GGSGSFGMGAAPQPVVQQKAAPSHGLRAGLQVFHNKFGEGTVLSVEGAGEEARAQVNFPR
HGVKWLALSVAKLTVV
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atgtttccagactcctcgcaggacggcctgttcgcggcacagcccgcatccggcccagcg
gcctccgcgccgctgctcgccaacctcaatcccgaacagctggcggcggtgacgctgccg
gccggccatgcgctgatcctggccggcgccggctcgggcaagacgcgggtgctcaccacc
cgcatcgcctggctgctgcagaccggccaggtctcgcccggcggcatcctggcggtgacc
ttcaccaacaaggccgccaaggagatgcaggcgcgtctccaggccatgctgccggtgaac
acccgcggcatgtggatcggcaccttccacggcctgtgcaaccgcctgctgcgggcgcat
tacaagctggtgaacctgccgcagtccttccagatcctggacacgcaggacatgctctcg
gccatcaagcgcctgatgaaggagcacaaggtcgacgacgaacgtttcccggccaagcag
gtgcagtacttcatcagcggcgccaaggaagacggcaaccgccccaccgacatccagccg
cgcggcgaggacgaccgcaagaaggtggagctctacgccctgtacgaggcccagtgccag
cgcgagggcgtggtcgatttcggcgagctgatgctgcgcagctacgagctgctgcgcgac
cacgcaccagtgcgcgagcactatcagcagcgcttccgccacatcctggtcgatgagttc
caggacaccaaccggctgcagtacgcctggttgaagcaactggccggcccgaacgccagc
gtgctggcggtgggcgacgacgaccagagcatctacgccttccgtggcgccaacgtcggc
aacatggccgacttcgtgcgcgaattcgatgtgaagcaccagatcaagctggagcagaac
taccgcagcttcagcaacatcctggactcggccaaccacctgatcagccacaacagccgg
cgcctgggcaagaacctgcgcaccgaccagggtccgggcgagccggtgcgggtgtacgag
gccaccagcgatttcgccgaggcgcagtggatcgtcgaggagatccgccaactggtgcgc
gacggcaccgatcgcaaggagatcgcctgtctctaccgcagcaatgcgcagagccgggtg
atcgagacggcgctgttcaacgccgccgtgccctaccgggtgtatggcggcctgcgcttc
ttcgagcgcgccgaaatcaagcatgcgctggcctacctgcgcctgctggagaacccgagc
gacgacaccagtttcctgcgggtggtgaacttcccgccgcgcggcatcggcgcacgcagc
ctggagcaactgcaggatgcggcgcgcgagatgggctgctcgctgcacgacgcggtatcc
agcatcaagggcaaggccggcaccaacctgggcgccttcgtggcgctggtggatgtggtg
cgcgagcagagccagggccagccgctgcgcgccatcatcgagcaggtgctcgatgccagc
ggcctgctgatccactaccgggccgagcgcgagggcgccgaccgggtggagaacctggag
gaactggtcaacgcggccgagagtttcgtctccatcgagggcttcggccgcgatgccaac
ggcatggatgcgcggccctcgcagtcgccggccagccaggggctggacctgtcccagccg
gtgctggaccagccgctggacgaaccgcccgccttcgacgccgagaccggcgagacccag
agcccgctggtcgccttcctcacccatgcagccctggaggccggcgacaaccaggcccag
gccggccaggacgccgtgcagctgatgacggtgcatgcctcgaagggcctggagttcgac
tgcgtcttcatcggcggcatggaagagggcctgttcccgcacgagaactccatgagcgac
cgcgacggcctggaagaggagcgccgcctgatgtacgtggcgatcacccgtgcgcgcaag
cgcctgtacctgagccattcgcagacccgcatgctgcacggccagacgcgttaccacgtc
aagagccgcttcttcgaggagctgcccgagaacacactgaagtggatcacgcccaagcaa
tcggccttcggcgcctatgcgccgcgggccggcgctggcggttcgggctcgggctggggc
ggcggatcgggcagcttcggcatgggtgccgcgccgcaaccggtggttcagcagaaggcc
gcgcccagccatgggctgcgggcggggctgcaggtgttccacaacaagttcggggaaggc
accgtgctgtcggtggagggcgccggcgaggaggcgcgggcccaggtcaacttcccgcgc
cacggggtaaagtggctggcgctgtccgtcgccaaattgacggtggtctga
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