Xylophilus rhododendri: GT347_23115
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Entry
GT347_23115 CDS
T06383
Name
(GenBank) ATP-binding cassette domain-containing protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_23115
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_23115
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GT347_23115
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
TOBE_2
AAA_21
SMC_N
Rad17
AAA_25
AAA_22
CysA_C_terminal
ABC_ATPase
AAA
nSTAND3
AAA_30
nSTAND1
NACHT
AAA_28
NB-ARC
nSTAND_NTPase5
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
QHJ00617
UniProt:
A0A857J9N8
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All DBs
Position
4996170..4997237
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AA seq
355 aa
AA seq
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MSFLQLSGVSKFYGDTCAVADMNLSVEKGEFVSLLGPSGCGKTTTLQMIAGFEPVTRGRI
ELDARDITQAKANTRGLGIVFQSYALFPHMTVEANVSFGLEMRKMAKAERLDRVRHALSL
VHLDQHARRYPRELSGGQRQRVALARALVIEPPVLLLDEPLSNLDAKLREEMQFELRQIQ
RKVGTTTVMVTHDQSEAMSVSDRVVVMEAGRATQIDHPFQVYEHPRTRFISTFVGKANLL
EGRIEGEDDMQAVRVGSLSVPMFEPGFRPGSAVLLAVRPEKLQLVPAGAGRLDGQVIERF
FLGSQWLYRLSTPVGELTVLCANDGRIVLEEGAQSAIDWPDSCTRVLPVDQGALA
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgtcattcctccagctcagcggcgtcagcaagttctacggcgatacctgcgccgtggcc
gacatgaacctgtcggtcgagaagggcgagttcgtctcgctgctcggcccctcgggctgc
ggcaagaccaccaccctgcagatgattgccggcttcgagccggtgacccgcggccgcatc
gaactcgacgcccgcgacatcacccaggccaaggccaacacccgcggcctgggcatcgtg
ttccagagctacgccctgttcccgcacatgacggtggaggccaacgtgagcttcggcctg
gagatgcgcaagatggcgaaggccgagcgcctggaccgcgtccgccatgccctctccctg
gtccacctcgaccagcacgccagacgctacccgcgtgaactctccggcggccagcgccag
cgcgtggccctggcgcgtgccctggtgatcgagccgccggtgctgctgctggacgaacct
ctgtccaacctcgacgccaagctgcgcgaggagatgcagttcgagctgcgccagatccag
cgcaaggtcggcaccaccaccgtgatggtcacccacgaccagagcgaagccatgtcggtc
agcgaccgggtggtggtgatggaggccggccgggccacgcagatcgaccatcccttccag
gtctacgagcatccgcgcacccgcttcatctcgaccttcgtcggcaaggccaatctgctc
gaaggccgcatcgagggcgaggacgacatgcaggcggtgcgggtcggatcgctctcggtg
cccatgttcgaaccgggtttccgcccgggcagcgcggtgctgctggcggtgcggccggag
aagctgcagctggtgccggcgggcgccggccggctcgacggccaggtcatcgaacgattc
ttcctcggcagccagtggctctaccgcctgtccacaccggtcggcgagctgacggtgctc
tgcgccaacgacggccgcatcgtgctggaggagggcgcgcagtcggccatcgactggccg
gacagctgcacccgcgtgctgccggtcgaccaaggggcgctcgcatga
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