Xylophilus rhododendri: GT347_23145
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Entry
GT347_23145 CDS
T06383
Name
(GenBank) extracellular solute-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
xyk
Xylophilus rhododendri
Pathway
xyk02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
GT347_23145
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_23145
Transporters [BR:
xyk02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
GT347_23145
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_6
SBP_bac_11
SBP_bac_1
Motif
Other DBs
NCBI-ProteinID:
QHJ00623
UniProt:
A0A857JCD3
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All DBs
Position
5001719..5002786
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AA seq
355 aa
AA seq
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MTSAKTSLPGRRILLAVAAAASLALSAGAQAQTKTIYIGMNGGTMEKAYTQYVFPAFEKQ
NNVKVVVVPGTSADILAKAQANKDKPQMHVMFLDDGVMVRAIGMGLCEKQRPSATLKEIY
PVARFKDDMATSISLGMTGLAYNKKMFTEKGWAAPTSWMDMADPKFKGKLVFPSITSSSF
GLHGFLMFNRIQGGNDQNVEPGFAAWPKTVGPNVLEYIPSSAKISEMVQTGEAALFPLTP
SGVAALKARGIPVEYAQPKEGAVLLMVGQCVIANNSEPELAQKLAEFLLTPQAQANMLEH
GNIVPTNPKAPVVGAGIQQVAEIKEWLKNAITVDWASVNANRSAWNSRWNRTIER
NT seq
1068 nt
NT seq
+upstream
nt +downstream
nt
atgacctccgccaagacttccctccctggccgccgcatcctgctggcggtggccgccgcc
gcatccctggccttgagcgctggagcgcaggcgcagaccaagacgatctacatcggcatg
aacggcggcaccatggagaaggcgtacacccagtacgtcttccccgccttcgagaagcag
aacaacgtgaaggtggtggtggtgcccggcacctcggccgacatcctggccaaggcgcag
gccaacaaggacaagccgcagatgcatgtcatgttcctggacgacggcgtgatggtgcgc
gccatcggcatgggcctgtgcgagaagcagcggcccagcgccacgctcaaggaaatctat
ccggtcgcccgcttcaaggacgacatggcgacctccatctcgctgggcatgaccgggctg
gcctacaacaagaagatgttcaccgagaagggctgggcggcgcctacctcgtggatggac
atggcggaccccaagttcaagggcaagctggtgtttccttcgatcacctcgtcttccttc
gggctgcacggctttttgatgttcaaccgtatccagggtggcaatgaccagaacgtggag
ccggggttcgctgcctggcccaagacggtcgggccgaatgtgctggagtacatccccagc
tcggccaagatctccgagatggtgcagacgggggaggctgcgctgtttcctctcacgccc
agtggcgttgccgctttgaaggcccgcggcattccggtcgagtacgcccagcccaaggaa
ggcgctgtgctgctgatggtggggcaatgcgtgattgccaataactccgagcctgaactg
gcgcagaagctcgccgagttcctgctcacgcctcaggcgcaggccaatatgctggagcac
gggaatatcgtgcctaccaatcccaaggcgcctgttgtcggggctggcattcagcaggtt
gctgagatcaaggagtggttgaagaacgctattaccgttgactgggcttcggtcaacgct
aaccgtagtgcttggaattcgcggtggaatcggactattgagcgttga
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