Xylophilus rhododendri: GT347_24775
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Entry
GT347_24775 CDS
T06383
Name
(GenBank) OmpA family protein
KO
K03286
OmpA-OmpF porin, OOP family
Organism
xyk
Xylophilus rhododendri
Brite
KEGG Orthology (KO) [BR:
xyk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
xyk02000
]
GT347_24775
Transporters [BR:
xyk02000
]
Other transporters
Pores ion channels [TC:
1
]
GT347_24775
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OmpA
DUF748
DUF4892
Motif
Other DBs
NCBI-ProteinID:
QHJ00921
UniProt:
A0A857JA82
LinkDB
All DBs
Position
complement(5360684..5361712)
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AA seq
342 aa
AA seq
DB search
MIDRGRIRNWFLAGALLLAGSAGMAAADAVQADVKGGRDHPLIQRFSGSWMAGYKFNEWE
QASFPSGMAVKDESWVDPVTVEGRVTKAIYVSPPGKSPLEVFRNYEQALTGAGFQRRFSC
ESQCAPLYRAMRRNDAYTSGMTWAAGSVITPTGSRYSLNAGTATTEQGRFWYGTLPRNGQ
LVHVLIYSSVASDISTNQAATFVQVAEPKAMPTGQVTVDTEALDKGLKAEGRIALYGLFF
DTGKAQIKPESTAQLAEMAKLLKAQPALRVYIVGHTDNQGSLESNMALSQQRAQAVAGAL
AASYKIEAARMVGRGVASLAPLASNAAEEGRAKNRRVELVLQ
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgatcgacaggggacggatacgcaactggttcctggcaggcgctctgctgctggcaggc
tccgccggcatggccgccgccgacgcggttcaggccgatgtcaagggcgggcgcgaccat
ccgctgatccagcgcttcagcggctcctggatggcgggctacaagttcaacgaatgggag
caggcgagctttccgagcggcatggccgtcaaggacgagagctgggtcgatccggtcacg
gtcgaaggccgtgtgaccaaggcgatctatgtctccccgcccggcaagtcgccgctggaa
gtcttccgcaattacgagcaggcgctgaccggcgccggcttccagcgccgcttttcctgc
gagagccagtgcgcgccgctctaccgcgccatgcgccgcaacgatgcctatacctcgggc
atgacctgggccgcgggcagcgtgatcacccccaccggaagccgctacagcctgaacgcc
ggcacggcgaccaccgagcagggccgcttctggtacggcaccctgccacgcaacgggcag
ctggtgcatgtgctcatctacagctcggtggccagcgatatcagcaccaaccaggccgcc
accttcgtgcaggtggccgaacccaaggccatgccgaccgggcaggtcacggtggatacc
gaggcgctggacaagggcctgaaggccgagggcaggatcgccctctacggcctgttcttc
gataccggcaaggcccagatcaagcccgaatcgacggcccagctcgccgagatggccaag
ctgctgaaggcgcagccggcgctgcgggtttacatcgtcgggcataccgacaaccagggc
tcgctggaatccaacatggcgctgtcccagcagcgcgcgcaggcggtggccggcgcgctg
gccgccagctacaagatcgaggctgcgcgcatggtcggccgcggcgtcgccagcctggcg
ccgctggccagcaatgccgccgaagaaggccgtgcgaagaaccggcgggtggaactggtg
ctccagtaa
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