KEGG   Xylophilus rhododendri: GT347_25060
Entry
GT347_25060       CDS       T06383                                 
Symbol
tssM
Name
(GenBank) type VI secretion system membrane subunit TssM
  KO
K11891  type VI secretion system protein ImpL
Organism
xyk  Xylophilus rhododendri
Pathway
xyk03070  Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:xyk00001]
 09130 Environmental Information Processing
  09131 Membrane transport
   03070 Bacterial secretion system
    GT347_25060 (tssM)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:xyk02044]
    GT347_25060 (tssM)
Secretion system [BR:xyk02044]
 Type VI secretion system
  Imp/Vas secretion system core components
   GT347_25060 (tssM)
SSDB
Motif
Pfam: IcmF-related_N IcmF-related IcmF_C IcmF_helical Ferric_reduct 7TMR-DISM_7TM
Other DBs
NCBI-ProteinID: QHJ00969
UniProt: A0A857JDW5
LinkDB
Position
complement(5416727..5420308)
AA seq 1193 aa
MKKFLQILLHPIALALYGLLALSALVWWVSPLIAFGENHPFDGMWTRLGVIALMVLVWLL
IVGLRALRRKRANAELLQGLSGGGNKAGREAEQLDERFKEALTVLEDSAKQSGKRGFFKR
GQYLYDLPWYIFIGAPGSGKTTALLNAGLTFPLAGKMGQAPVKGVGGTRNCDWWFTDEAV
LIDTAGRYTLQQSDEKADASAWEKFLDLLKKSRPRRPINGVLLTLNVQDLLQQSPADRKE
HAQRLRARLQELHERLGVRPPVYVLVTKSDLIAGFNETFGDFGKEERDQVWGFSFPYDPR
GEDTPVQEFASEFAALEKRLRDRVLDRMESQQDPLKRAAIFSFPQQFAGLKGLMGGFLES
VFDGGGQLEQRALLRGVYFTSGTQEGTPIDRVLGTLARTFGVDQKAASIASTRGKSFFLT
RLLSEVVFTEQGLVGENRRAESSRKRRRVLGLATIAVLSLVLIAGWAMSWMRNKAYVDEV
QARLSEVKSAVEALPPAGSTDVSALPQVLDKVAAAPKPTGYDIDHPPLLNTLGLYQGDYL
QAGADIGYRHLLDRALLPRVAKRLEERLRAVDRNNLELAYEALKGYLMLYTPEHFDAEAL
KAWVTLDWDANLAGTLTPEQRAALATHLDAALAEGAPRALAPMDKTLVANVREMLVAYPL
EYRVFSRLKRAQVGADFPEFSVASAGGPNAAQVFERASGQPITKGIPGLFTRDGYFKAFK
GAVAKVANQLQDEQNWVLGVNAPAASLKAQAGTALGSIAASNGGEMGERVRRLYLQEYIK
VWDDYLADVRLVRLGGLDRSLAVARVLAAPDSPLPAYLRAVARETQLADQAQKEAAAGSG
LAKIDEKANKAKADMAALVGNKTDPNAKVAGAPLEALVDTHFAYLHRMVAGTPAPIDDVT
KLFNEVFVQLNAVDAAQKSKSAPPPAAAGGGAAAKAAAALQPEPIKSMLMALGDAGASQS
MNAERQGLSGDLKPVTDFCSRTIAGRYPFAQGSKSDVLPDDFGQFFGVGGMMDDFFARRL
ATIVDIGATPWVYKPLADGSKPPGGAALADFQRAAKIKEAFFRNGGKAPGFKVDLRVLEM
PAGMSDITIDVDGQALKFAAGNTAAQTINWPSTRVASQIKLSAGGGATQMFEGPWALFRM
LNAFEVQASPQPERFVVVLNLDGKKARMEVISSSAINPLRMREVAAFRCPDGL
NT seq 3582 nt   +upstreamnt  +downstreamnt
atgaagaagtttctgcaaatcctcctgcaccccatcgccctggcgctgtacggcctgctg
gccctgtccgccctggtctggtgggtgagcccgctgatcgccttcggcgagaaccatccc
ttcgacggcatgtggacccgcctgggcgtgatcgccctgatggtgctggtctggctgctg
atcgtgggcctgcgcgccctgcgccgcaaacgcgccaacgccgaactgctgcagggcctg
agtggcggcggcaacaaggccggccgtgaagccgaacagctcgacgaacgcttcaaggaa
gcgctgaccgtgctggaagacagcgccaaacagtccggcaaacgcggcttcttcaagcgc
ggccagtacctctacgacctgccctggtacatcttcatcggtgcccccggctccggcaag
acgaccgccctgctcaacgccggcctcaccttccccctggccggcaagatgggccaggcg
ccggtcaagggcgtgggcggcacccgcaactgcgactggtggttcaccgacgaagccgtg
ctgatcgacaccgccggccgctacaccctgcagcagtccgacgagaaggccgacgcctcg
gcctgggagaaattcctcgacctgctcaagaagagccgcccgcgccgccccatcaacggc
gtgctgctcaccctcaacgtgcaggatcttctgcagcaaagccccgccgaccgcaaggaa
cacgcccagcgcctgcgcgcccgcctgcaggagctgcacgaacgcctgggcgtgcgcccg
ccggtgtatgtgctggtcaccaagagcgacctgatcgccggcttcaacgaaaccttcggc
gacttcggcaaggaagaacgcgaccaggtctggggcttcagcttcccctacgacccacgc
ggcgaagacacccccgtgcaggaattcgccagcgaattcgccgccctggaaaaacgcctg
cgcgaccgcgtgctggaccgcatggagagccagcaggacccgctcaaacgcgccgccatc
ttctccttcccccagcagttcgcgggcctgaagggcctgatgggcggcttcctggaatcc
gtcttcgacggcggcggccagctggaacagcgcgccctgctgcgcggcgtgtacttcacc
agcggcacccaggagggcacacccatcgaccgcgtgctgggcaccctggcccgcaccttc
ggcgtggaccagaaggcggcctccatcgcctccacgcgcggcaagagcttcttcctgacg
cggctgctgagcgaagtcgtcttcaccgaacaaggcctggtcggcgagaaccgccgcgcc
gaatccagccgcaagcgccgccgcgtgctgggcctggccaccatcgccgtgctgagcctg
gtgctgatcgccggctgggccatgagctggatgcgcaacaaggcctacgtcgatgaagtg
caggcccgcctgtcggaagtcaaatccgccgtggaggccctgccgcccgccggcagcacc
gacgtgagcgccctgccgcaagtgctggacaaggtggccgccgcccccaagcccaccggc
tacgacatcgaccacccgcccctgctcaacaccctgggcctgtaccagggcgactacctg
caggccggcgccgacatcggctaccgccacctgctggaccgcgccctgctgccccgcgtg
gccaagcgcctggaagagcgcctgcgcgcggtggaccgcaacaacctggagctggcctac
gaagccctcaagggctacctgatgctctacacccccgagcacttcgacgccgaggcgctg
aaagcctgggtgaccctggactgggacgccaacctggccggtaccctgacgcccgaacaa
cgcgccgccctggccacccacctcgacgccgccctggccgaaggcgccccccgcgccctc
gcccccatggacaagaccctggtggccaatgtgcgcgagatgctggtggcctacccgctg
gaataccgcgtcttcagccgcctgaagcgtgcccaggtgggcgccgatttccccgagttc
tcggtggcatcggccggcggccccaacgccgcccaggtcttcgagcgggccagcggccag
cccatcaccaagggcatcccgggcctgttcacccgcgacgggtatttcaaggccttcaag
ggcgccgtcgccaaggtggccaaccagctgcaggacgaacagaactgggtgctgggcgtg
aacgcccccgccgcctccctgaaggcacaggccggcaccgcgctgggctccatcgccgcc
agcaacggcggcgagatgggcgaacgcgtgcgccgcctctacctgcaggaatacatcaag
gtgtgggacgactacctggccgacgtgcgcctggtgcgcctgggcggcctggaccgcagc
ctggccgtggcccgcgtgctggcagcgccggactcgcccctgcccgcctacctgcgcgcc
gtggcccgagaaacccagctggccgaccaggcccagaaggaagccgcggccggctccggc
ctggccaagatcgacgagaaagccaacaaggccaaggccgacatggccgccctggtcggc
aacaagacggacccgaacgccaaggtggccggcgccccgctggaagccctggtggacacc
catttcgcctacctgcaccgcatggtggccggcacccccgcgcccatcgacgacgtgacc
aagctcttcaacgaggtcttcgtgcagctcaacgccgtggacgccgcgcagaagagcaag
agcgccccgcccccggccgccgccggcggcggagcggcggccaaggcggcagcagccctg
cagcccgagcccatcaagtcgatgctgatggccctgggcgatgccggcgccagccagagc
atgaacgcagagcggcaaggcctgagcggcgacctgaagccggtcaccgacttctgcagc
cgcaccatcgccggccgctatccctttgcgcagggcagcaagtcggacgtgctgccggac
gacttcggccagttcttcggcgtgggcggaatgatggacgacttcttcgcccgccgcctg
gccaccatcgtggacatcggcgccaccccctgggtctacaaaccattggccgacggcagc
aagccgcccggcggcgccgcgctggcggactttcagcgggcagcaaagatcaaggaggct
ttcttccgcaacggcggcaaggcgcctggcttcaaggtggacctgcgggtgctggagatg
cctgcgggcatgagcgacatcaccatcgatgtggatgggcaggcgctgaagttcgcggcg
gggaatacggctgcgcagacgatcaactggcccagtacccgggtggcttcgcagatcaag
ctgagtgcgggtggcggggctacgcagatgttcgaagggccttgggcgctgttccggatg
ttgaatgcgtttgaggttcaggcttcgccgcagccggagagattcgtggttgtgctgaat
ctggatgggaagaaggctcggatggaggtgatttccagtagtgcgattaatccgttgagg
atgcgggaggttgcggcttttaggtgtccggatgggttatga

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