Xylanimonas allomyrinae: ET495_02675
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Entry
ET495_02675 CDS
T05814
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
xyl
Xylanimonas allomyrinae
Pathway
xyl03030
DNA replication
xyl03430
Mismatch repair
xyl03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
xyl00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
ET495_02675
03430 Mismatch repair
ET495_02675
03440 Homologous recombination
ET495_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xyl03032
]
ET495_02675
03400 DNA repair and recombination proteins [BR:
xyl03400
]
ET495_02675
Enzymes [BR:
xyl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
ET495_02675
DNA replication proteins [BR:
xyl03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
ET495_02675
DNA repair and recombination proteins [BR:
xyl03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
ET495_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
MCM10_OB
HHH_3
Motif
Other DBs
NCBI-ProteinID:
QAY62347
UniProt:
A0A4P6EPZ7
LinkDB
All DBs
Position
600144..603716
Genome browser
AA seq
1190 aa
AA seq
DB search
MPAATDDFVHLHVHTEYSMLDGASLLDGLFERVTDQGMSAIAMTDHGNMHGAYDFYSKAK
RSGVKPIIGIEAYLTPGTARGDRTRVRWGKGETAEEGGDDVSGGGAYTHLTMWSETTEGM
HNLFRLSSLASLEGYYFKPRMDKELLQRYSKGLIVSTGCPSGAVQTRLRLGQYEEAVREA
ADLQDIFGRDNVYLELMDHGISIEKRVRDDLLRLGRELGLKPVATNDSHYNNPEDASAQE
ALLCVNSGSRLSEPTYAQGGKRFAFDGNGYYIKSAREMRDLWDGQGLLEACDTTLEIAER
CDVAFVESTGGYMARADIPAGETEESWFRKEVWRGIESRYPGDALTQEVRDRVEMELGVV
AQKGYCGYYLVVADFIQWSKRNGIRVGPGRGSGAGSIAAYALRITDLDPLEHGLFFERFL
NPERPSMPDFDIDFDDHRRGEVIAYVTEKYGTERVAQIATFGRIKAKAAIKDAARILDYD
FATGDRITKALPPDVMGKSIKLKAVFDEKDPRYAEAGEFRALHDSDPNVQKIYKTALGLE
GQIRQTGVHAAGVIMSSEPIIDVVPIMDPKGDGQVITQFEYPMAEALGLVKMDFLGLSNL
HTIEDALENIRANLGEDLVLEDVPFDDRATYELMGRGETLGVFQLDGSGMRALLRSMQPD
VFADITAVSALYRPGPMGADSHNKYAHRKNGRQPIEPIHPELAEALEPVLGETYGLIVYQ
EQVMAIAQVLAGYSLGAADNMRRVMGKKKKAELDKQFDGFQAGMLERGFSKAAVKTLWDI
LVPFADYAFNKSHSAAYGVVTYWTAYLKANYPSEYMAALLQSVKDDKDKMALYLNECRRM
HITVLPPDVNDSAAKFTAVGTDIRFGLGAVRNVGANVVAAIVEAREAAGRFTSFTDFLDK
VPAVVCNKRTIESLIKAGAFDSLERSRRALLVVHEQAVDAVIAVKRKEAEGQFDLFAGFG
GDDDDDGLSFAVDVPDLPDWDKKQKLAFEREMLGLYVSDHPLSGLEHVLARAADTSIAAL
VGDEGRAENSTVTVAGLITSLQRKMSKNGNPWAAVTVEDLEGSVEVMFFGETYLAYSTAL
AEDQVVAVRGRVRRRDDQLSLQAMEVALPDTSAVADAPVHVAVPHTRCVEPVMVRLREVL
SSHPGSAEVHVTVAEPGKRTVVRAADSLRVEKSPALFGDLKALLGPACLG
NT seq
3573 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcggcgaccgacgacttcgtccacctccacgtccacaccgagtactcgatgctc
gacggcgcgtcgctgctcgacgggctgttcgagcgagtgaccgaccagggcatgtcggcc
atcgcgatgacggaccacggcaacatgcacggcgcctacgacttctactccaaggccaag
cgcagcggcgtcaagccgatcatcgggatcgaggcgtacctgacgccggggaccgcgcgg
ggagaccgcacccgtgtgcgctggggcaagggcgagaccgctgaggagggcggcgacgac
gtctcgggcggcggtgcttacacgcacctgacgatgtggtcggagacaaccgagggcatg
cacaacctcttccggctctcgtcgctcgcgagcctggagggctactacttcaagccccgg
atggacaaggagctgctccagcggtacagcaagggcctcatcgtctccacgggctgcccc
agcggcgccgtccagacgcggctgcgcctgggccagtacgaggaggccgtccgcgaggcc
gccgacctgcaggacatcttcgggcgcgacaacgtctacctcgagctgatggaccacggc
atctcgatcgagaagagggtccgggacgacctgctgcggctcggccgcgagctcggcctg
aagcccgtggcgaccaacgactcgcactacaacaaccctgaggacgccagcgctcaggag
gcgttgctgtgcgtcaactcgggcagcaggctctccgagcccacgtacgcgcagggcggc
aagcggttcgccttcgacgggaacggctactacatcaagtccgcccgcgagatgcgtgac
ctgtgggacggacagggcctgctggaggcctgcgacacgaccctcgagatcgccgagcgg
tgcgacgtcgcgttcgtcgagtcgaccggcgggtacatggcccgggccgacatcccggcc
ggcgagaccgaggagagctggttccgcaaggaggtctggcgcggtatcgagtcgcgctac
ccgggcgacgcgctcacgcaggaggtgcgcgaccgtgtcgagatggagctcggcgtcgtc
gcccagaagggctactgcggctactacctcgtggtggccgacttcatccagtggtccaag
cgcaacggcatccgggtcgggccgggccgtggctcgggcgccggctcgatcgcggcctac
gcgctgcggatcacggacctggacccgctcgagcacgggctgttcttcgagcgcttcctc
aacccggagcgcccgtcgatgcccgacttcgacatcgacttcgacgaccaccgccgcggc
gaggtcatcgcctacgtgaccgagaagtacggcacggagcgcgtcgcccagatcgccacg
ttcggacggatcaaggccaaggccgcgatcaaggacgctgcgcgcatcctcgactacgac
ttcgccaccggcgaccggatcaccaaggcactgccgcccgacgtgatgggcaagtccatc
aagctcaaggccgtcttcgacgagaaggacccgcggtacgccgaggcgggcgagttccgc
gcgctgcacgacagcgaccccaacgtccagaagatctacaagaccgcgctcggcctcgaa
ggccagatccggcagacgggcgtgcacgccgccggcgtcatcatgtcgagcgagccgatc
atcgacgtcgtcccgatcatggaccccaagggcgacggtcaggtcatcacccagttcgag
tacccgatggccgaggcgctcgggctggtcaagatggacttcctcggcctgtccaacctg
cacacgatcgaggacgccctggagaacatccgggcgaacctcggcgaggacctggtgctc
gaggacgtcccgttcgacgaccgggcgacgtatgagctcatgggccgtggcgagacgctg
ggcgtgttccagctcgatggcagtggcatgcgcgcgctgctgcgctcgatgcagccggac
gtcttcgccgacatcaccgccgtctccgcgctctaccggcccgggccgatgggtgccgac
tcgcacaacaagtacgcgcaccgcaagaacgggcgccagccgatcgagccgatccacccc
gagcttgccgaggcgctcgaaccggtgctgggggagacctacggcctgatcgtgtaccag
gagcaggtcatggcgatcgcccaggtgctcgccgggtactcgctcggcgccgcagacaac
atgcgccgcgtcatgggcaagaagaagaaggccgagctcgacaagcagttcgacggcttc
caggcgggcatgctcgagcgcgggttctcgaaggccgcggtcaagacgctgtgggacatc
ctcgtcccgttcgccgactacgcgttcaacaagtcgcactcggcggcgtacggcgtcgtc
acctactggacggcctacctcaaggcgaactacccgtccgagtacatggccgcgctcctg
cagtccgtcaaggacgacaaggacaagatggcgctctacctcaacgagtgccgccgcatg
cacatcaccgtcctgcccccggacgtcaacgactccgcggcgaagttcacggcggtcggc
acggacatccgcttcggcctgggcgcggtgcgcaacgtcggcgccaacgtcgtggccgcg
atcgtcgaggcgcgcgaggcggccggacggttcacgtcctttaccgacttcctcgacaag
gtcccggccgtggtctgcaacaagcgcaccatcgagtcgctcatcaaggcgggggcgttc
gactcgctcgagcgctcgcgccgggcgctgctcgtcgtgcacgagcaggccgtcgacgcc
gtcatcgcggtcaagcgcaaggaggccgagggccagttcgacctgttcgccgggttcgga
ggcgacgacgacgatgacggcttgagcttcgccgtcgacgtgccggacctgcccgactgg
gacaagaagcagaagcttgccttcgagcgcgagatgctcggcctctacgtctccgaccac
ccgctctcgggcctcgagcacgtgctggcgcgcgccgccgacacgtcgatcgccgcgctc
gttggcgacgaggggcgcgcggagaactcgacggtcacggttgcggggctgatcaccagc
ctgcagcgcaagatgagcaagaacggcaacccgtgggcggccgtcaccgtcgaggacctc
gagggctcggtcgaggtcatgttcttcggcgagacctacctcgcctattcgacggcgctc
gccgaggaccaggtggtcgccgtccgtggtcgtgtgcggcgccgcgacgaccagctctcg
ctgcaggcgatggaggtcgcgctccctgacacgtcggccgtcgcggacgcgcccgtgcac
gtcgccgtgccgcacacgcggtgcgtcgagcccgtcatggtcaggctgcgcgaggtcctc
tcgtcgcatcccgggtcggccgaggtgcacgtcaccgtcgcagagcccggcaagcgcacc
gtggtgcgggccgcggactcgctgcgcgtcgagaagtcgcccgcgctcttcggcgacctc
aaggcgctgctcggcccggcgtgcctgggatga
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