Xylanimonas allomyrinae: ET495_04795
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Entry
ET495_04795 CDS
T05814
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
xyl
Xylanimonas allomyrinae
Pathway
xyl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
xyl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ET495_04795
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
xyl03019
]
ET495_04795
03009 Ribosome biogenesis [BR:
xyl03009
]
ET495_04795
Enzymes [BR:
xyl01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ET495_04795
Messenger RNA biogenesis [BR:
xyl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ET495_04795
Ribosome biogenesis [BR:
xyl03009
]
Prokaryotic type
rRNA helicases
ET495_04795
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
QAY62690
UniProt:
A0A4P6EJA6
LinkDB
All DBs
Position
1062057..1064051
Genome browser
AA seq
664 aa
AA seq
DB search
MPTSPDPVVPSEAPALPGFDTLGLPAALEAAVADLGFTTPSAIQAQAIPALLAGRDITGV
AQTGTGKTAAFGLPLLASITDDGARPHIQGLVLTPTRELAIQVSEAIESFATHLPGIRVL
AVYGGAPYMPQQRALRDGVHVVVGTPGRIMDHMERGALVLDDVRFLVLDEADEMLHMGFA
EDVDQIFSKAPAKRQVALFSATMPPAIRNVADNHLTDPVEVAVARQSSTVASVHQAYAVV
PFRHKVGALTRILATSDADASIVFTRTRSAAEEVGAALIEKGISAATISGDVAQKEREKI
VERLRSGALDVLVATDVAARGLDVDRIGLVVNFDIPREPEAYVHRIGRTGRAGRTGRAVS
FITPHERGKLKHIEATIKVRLEEAEIPSPRDVSAYRAKRMLDGVPARTQAGRLDLYTQLV
RDQVTVGDGEQPGTVDPAKAVELAATLLALAVGDDGPRARAEQEEFEREQAEGRAARQAR
ETRKHELGDGRGARGDRFERTDRRHARDGDERPFTRGTGIRRPAAGTRYRVAVGHQDGVN
PGGIVGALTGEGGLTGSDVGKIDIFGAFSLVDITAPLSESQLDRLARARVAGRALRISVD
RGAPADGPRGARFDRPARFERGGRDERPGRFDRDERAPRFDRSDRPERKPRTERAALGER
KPRW
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccagccctgaccccgtcgtgccctccgaggcaccggccctgcccggcttcgac
acgctcggcctgccggccgccctcgaggcagcggtcgccgacctcggcttcaccaccccc
tccgccatccaggcccaggccatcccggcactcctcgccggacgcgacatcaccggcgtc
gcccagaccggcaccggcaagaccgccgcgttcggcctccccctgctggcctcgatcacc
gacgacggcgcgcgcccccacatccagggactcgtcctgacccccacgcgcgaactcgcc
atccaggtctccgaagccatcgagtccttcgccacccacctgcccggcatccgcgtcctc
gccgtctacggcggcgcgccctacatgccccagcagcgcgcgctgcgcgacggcgtccac
gtcgtcgtcggcacccccggccgcatcatggaccacatggagcgcggcgccctcgtgctc
gacgacgtgcgcttcctcgtgctcgacgaagccgacgagatgctccacatgggcttcgcc
gaagacgtcgaccagatcttctcgaaggcacccgccaagcggcaggtcgcgctcttctcc
gccaccatgccgcccgccatccgcaacgtcgccgacaaccacctcaccgaccccgtcgag
gtcgccgtcgcccggcagtcctcgaccgtcgcctcggtgcaccaggcctacgccgtcgtc
ccgttccgccacaaggtcggcgcgctcacccgcatcctcgccacctccgacgccgacgcc
agcatcgtcttcacccggacccgttcggccgccgaggaggtcggagccgccctcatcgag
aagggcatctccgccgccaccatctccggcgacgtcgcccagaaggaacgcgagaagatc
gtcgaacgcctgcgctccggcgccctcgacgtcctcgtcgccaccgacgtcgccgcacgc
ggcctcgacgtcgaccgcatcggactcgtcgtcaacttcgacatcccccgcgagcccgag
gcctacgtccaccgcatcggacgcaccggccgcgccggacgcaccggccgcgccgtctcc
ttcatcaccccccacgagcgcggcaagctcaagcacatcgaggccaccatcaaggtccgc
ctcgaagaggccgagatcccgtccccgcgcgacgtctccgcctaccgcgccaagcgcatg
ctcgacggcgtccccgcacgcacccaggccggccgcctcgacctgtacacccagctcgtg
cgcgaccaggtcaccgtcggagacggcgagcagcccggcaccgtcgaccccgccaaggcc
gtcgagctcgccgccacgctcctcgccctcgccgtcggagacgacggcccccgcgcccgc
gccgagcaggaggagttcgaacgcgagcaggccgagggccgcgccgcccggcaggcccgc
gagacccgcaagcacgagctcggcgacggccgcggcgctcgcggtgaccggttcgagcgc
accgaccgccgtcacgcgcgcgacggcgacgagcgtcccttcacgcggggcaccggcatc
cgccgcccggcagccgggacgcgttaccgcgtcgccgtcgggcaccaggacggcgtcaac
cctggcggtatcgtcggcgccctcacgggcgaaggcggcctgaccgggtcggacgtcggc
aagatcgacatcttcggcgcgttctcgctcgtcgacatcacggccccgctgagcgagtcg
cagctcgaccgcctggcgcgtgcccgtgtcgccggccgggcgctgcgcatctccgtcgac
cgcggcgcacccgcggacggcccgcgcggcgcccggttcgaccgcccggcacgcttcgag
cgcggcggccgtgacgagcgcccgggccggttcgaccgcgacgagcgcgcgccgcgcttc
gaccgctcggaccgcccggagcgcaagccgcgcaccgagcgcgccgctctcggggagcgc
aagccgcgctggtga
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