Xylanimonas allomyrinae: ET495_06215
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Entry
ET495_06215 CDS
T05814
Name
(GenBank) RNA polymerase sigma factor
KO
K03086
RNA polymerase primary sigma factor
Organism
xyl
Xylanimonas allomyrinae
Pathway
xyl02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
xyl00001
]
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
ET495_06215
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
xyl03021
]
ET495_06215
Transcription machinery [BR:
xyl03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
ET495_06215
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
CDC27
Motif
Other DBs
NCBI-ProteinID:
QAY64774
UniProt:
A0A4P6EPR0
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Position
complement(1355763..1357385)
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AA seq
540 aa
AA seq
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MPKGRLVASTSQSTAQQNTTLPREFEHPALQELLARGTSQGNVDADAFRTACEAAGVGDA
KRLKAVLKALSIAGVDVVMPTVAKVAAATTARTSTSARAKAPSARAAKPAAGTDEASDGK
PAPRAKAAAKPATTRKAAAKKTSPAKESKVTSEDDDVEIDDAEIDEAELVDEVDVAEDAD
GAEATETDEAEGDKPAAAKPAGADEEDTGFVVSDSDDEDQPAQQVVTAGATADPVKDYLK
QIGKVALLNAEQEVELAKRIEAGLFAEEKLGKEFAGFDRTKADADTRRLVRDLQWIAHDG
KRAKNHLLEANLRLVVSLAKRYTGRGMLFLDLIQEGNLGLIRAVEKFDYTKGYKFSTYAT
WWIRQAITRAMADQARTIRIPVHMVEVINKLARVQRQMLQDLGREPTPEELAKELDMTPE
KVVEVQKYGREPISLHTPLGEDGDSEFGDLIEDSEAVVPADAVSFTLLQEQLHQVLDTLS
EREAGVVSMRFGLQDGQPKTLDEIGKVYGVTRERIRQIESKTMSKLRHPSRSQVLRDYLD
NT seq
1623 nt
NT seq
+upstream
nt +downstream
nt
atcccgaaaggtcggttagtggcgtccacgtcccagagcaccgcacagcagaacaccaca
ctgccccgtgagtttgagcacccagcgctccaggagctgctggcacgcgggacgtcgcag
ggcaacgtcgacgccgacgcgttccgcaccgcgtgcgaagcggctggcgtcggcgacgca
aagcgcctcaaggccgtgctgaaagcgctgtcgatcgccggtgtcgacgtggtgatgccg
actgtggccaaggtcgccgcggcgaccacagcacgcaccagcacctcggcccgcgcaaag
gcgccgtcggcgcgcgcggcaaagcccgcagccggcacggacgaggcgtcggacggcaag
cccgccccccgggccaaggccgccgccaagcccgcgacgacccgcaaggccgccgccaag
aagacgtctcccgccaaggagtccaaagtcacgtccgaggacgacgacgtcgagatcgac
gacgccgagatcgacgaggccgagctcgtggacgaggtcgacgtcgccgaggacgcggac
ggcgcggaggcgaccgagaccgacgaggcagagggcgacaagccggcggccgccaagccc
gcaggcgccgacgaggaggacacggggttcgttgtctccgactcggacgacgaggaccag
ccggcccagcaggtcgtgaccgcgggcgcgacggccgacccggtcaaggactacctcaag
cagatcggcaaggtcgccctgctgaacgcggagcaggaggtcgagctcgcgaagcgcatc
gaggcgggactgttcgccgaggagaagctcggcaaggagttcgccggattcgaccgcacg
aaggcggacgccgacacgcgacgcctggtgcgggacctgcagtggatcgcgcatgacggc
aagcgcgccaagaaccacctgctcgaggccaacctgcgactggtcgtctcgctcgccaag
cgttacaccggccgcggcatgctcttcctggacctgatccaggagggcaacctcggtctg
atccgcgcggtcgagaagttcgactacaccaagggctacaagttctcgacctacgccacg
tggtggatccgccaggccatcacgcgtgccatggccgaccaggcgcgcaccatccgcatc
ccggtgcacatggtcgaggtcatcaacaagctggcccgcgtgcagcgccagatgctccag
gacctgggccgcgaacccacgccggaggagctggccaaggagctggacatgacccccgag
aaggtggtcgaggtccagaagtacggccgcgagcccatctcgctgcacacgccgctcggc
gaggacggcgactcggagttcggtgacctcatcgaggactccgaggccgtggtcccggcc
gacgcagtgtcgttcaccctgctccaggagcagctgcaccaggtgctcgacacgctctcc
gagcgtgaggcgggcgtggtctcaatgcgcttcggcctgcaggacggtcagcccaagacg
ctcgacgagatcggcaaggtctacggcgtcactcgtgagcgcatccgccagatcgagtcc
aagacgatgtccaagctgcggcacccgtcacgctcgcaggtgctgcgcgactatctcgac
tga
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