Xylanimonas allomyrinae: ET495_12400
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Entry
ET495_12400 CDS
T05814
Name
(GenBank) integration host factor
KO
K03530
DNA-binding protein HU-beta
Organism
xyl
Xylanimonas allomyrinae
Brite
KEGG Orthology (KO) [BR:
xyl00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
xyl03032
]
ET495_12400
03036 Chromosome and associated proteins [BR:
xyl03036
]
ET495_12400
03400 DNA repair and recombination proteins [BR:
xyl03400
]
ET495_12400
DNA replication proteins [BR:
xyl03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
ET495_12400
Chromosome and associated proteins [BR:
xyl03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
ET495_12400
DNA repair and recombination proteins [BR:
xyl03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
ET495_12400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-DNA_bdg
DUF7342
DUF2267
UPF0181
NA37
HU-CCDC81_euk_1
Motif
Other DBs
NCBI-ProteinID:
QAY63902
UniProt:
A0A4P6EML7
LinkDB
All DBs
Position
complement(2725843..2726127)
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AA seq
94 aa
AA seq
DB search
MSLNKSELVSAIAAKSELTKAQAEDALNAFQEVLVESLSKGEAVKITGLLAVERVERAAR
TGRNPRTGEEIQIPAGFGVKVSAGSVLKKAVAGE
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctcaacaagtccgagctcgtctcggcgatcgctgccaagtctgagctcaccaag
gcccaggccgaggacgccctgaacgcgttccaggaggtgctggtcgagtcgctcagcaag
ggcgaggccgtgaagatcacgggtctcctcgcggtcgagcgcgtcgagcgtgccgcccgc
acgggccgcaacccgcgcacgggcgaggagatccagatccccgccgggttcggcgtgaag
gtctcggcgggctcggtgctcaagaaggccgtcgccggcgagtga
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