Xylanimonas allomyrinae: ET495_14090
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Entry
ET495_14090 CDS
T05814
Name
(GenBank) sigma-70 family RNA polymerase sigma factor
Organism
xyl
Xylanimonas allomyrinae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
zf-HC2
Sigma70_r4_2
PhyR_sigma-like
Sigma70_r4
HL_N-beta
Motif
Other DBs
NCBI-ProteinID:
QAY64162
UniProt:
A0A4P6EN87
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All DBs
Position
3128786..3132868
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AA seq
1360 aa
AA seq
DB search
MTDVYIEPGDQLPVPSDAELILEVRGGDLAAYGALYERHAAAARRLALSYVRNVADAEDV
VADAFARVLGVLQSGQGPDQMFRAYLFTVVKNAAVELSRGHQRTHPTNDPATFESLLHAE
PSSEDPALAGFEKSVVSRAYQSLPERWQAVLWYTEVEGCTPAEIASILGLTPNGVSALAY
RAREGLRVGYLQQHLSNSPADGCRTINALLGGYVRGSLANREVAKVDAHLKTCGDCRTLV
LELSDVAHGMRGVIAPLVLGVAGLGLIGALPLGTLVGASAAGTAAAGAVAGSAASGSAVG
AAAAANAATGVAGSAVVANAGAAAGAGAATGAAAGAGAATGAAAGAGAATGAAAGAGAAT
GAAAGAGAATGAAAGAGAATGAAAGAAGAATSAAVAGGAATSAVASTVAATAGAGAILGG
TSMAAAAGAVAIAAVGVVSMLQAISPTTDALGPPPSTVVTASASTAAPLTPGPAPSISPS
DTSVLGQVFLLGEPARLVVAPVGTGTLQPRVPQRVTMKVLNKGEQTARDTTVRLSLATGL
DPDLGSASVGRSASLLSPDAPGCSLGADGSGDVLCDLGDITGGAAATVAFDVLARDGGSY
KISGEIWADGILRSPVDVPPAAVDPFGAELTAAWGTIPDLVNPGLGDLPLSVTNTGDVDA
AAGWSVDVALPDGLLLAGADGLTCAAAADAPQSVTCTDPDAALSPDAQVAAVLHVVAPAT
SGAGAMQVDARPVVAGGHAVSSSGTFTVARPWHGAHAETGIAAVCAATGGVGTADATVRG
TYRNTTHLAVTARLDAAGGSATSSVLTPGQSADLTVHDGLRVPAGTGTWTLTTTVAGTEY
STTLAAGQFDAVDCYDPVWDATTSAAVQNVGGTLQVAGTITNDTAEPFRVALRAAGVTSD
PVTLDPGATTTLVLDTGLASLPSGVAEFDLYRWVADVDGDPPVQGVVPRTPVTAAYAGAT
VAPALGPLTGDPVTSACTYDPAAETSVRRARIPLDNTGSTLPVSFTVGGVTAVLPAGASQ
VLTVPVAYGTTSLDVLADGRTIGSVPVRVASCATLAWPQDVAVTAQAQCTAQHLPELLAT
VATQGGRSYDVRISRGGRAWSDPAPVTPAGPATVRLGLGDGLTARGGRASVEVSRVVEGR
PLTAYTTVDYAAVSCVVTAPAARVALGGITVTETPDGPVSTRTAALVLDNTGSNVPVWFS
VPDVVGGSVRVPAGQTRTVDAGVVTGSAGATYRVSARSWSTTLTVAPFTGTAGWCAPAWD
RATQESGGYAAGAKVSFGSANYTYRGARVTDPDPAEGVADGSARANRGAGAAHGNDARGS
DARGNDRSGGHGGASRGAGGVLAPPTAGSGWDAAGACETR
NT seq
4083 nt
NT seq
+upstream
nt +downstream
nt
gtgacagacgtctacatcgaaccgggcgatcagctccctgtcccgagcgacgcggagctg
atccttgaggtgcgcggaggagatctcgccgcctacggcgcactctacgaacggcacgct
gccgcggcgcggcgactggcactgtcgtacgtgcggaacgtcgccgacgcggaggacgtc
gtcgccgacgcgttcgcgcgcgtgctcggcgtgctccagtcgggccagggccccgaccag
atgttccgcgcctacctgttcaccgtggtcaagaacgccgccgtcgagctgtccaggggc
caccagcgcacgcaccccacgaacgacccggcgacgttcgagtcgctgctgcacgccgag
ccgtcctcggaggaccccgccctggcggggttcgagaagtcggtggtgtcgcgcgcctac
cagagccttccggagcggtggcaggccgtgctctggtacaccgaggtcgagggctgcacg
cccgccgagatcgcgtcgatcctcgggctgacgcccaacggagtctccgcgctggcctac
cgcgcacgcgagggcctgcgggtcgggtacctgcagcagcacctgtcgaactcgcccgcg
gacggctgccgcaccatcaacgccctgctcggcgggtacgtgcgcgggtcgctcgccaac
cgcgaggtcgccaaggtcgacgcgcacctcaagacctgcggcgactgccgcacgctcgtg
ctcgagctgtccgacgtcgcgcacgggatgcgtggcgtcatcgccccgctcgtcctgggc
gtcgctgggctcgggctgatcggggcgctgcccctgggcacgctcgtcggcgcctcggcg
gcagggaccgctgcggccggggcggtcgccggctcggccgcgtccggatccgccgtcgga
gccgccgcggccgccaacgccgcgaccggcgtggcgggcagcgccgtcgtcgccaacgcc
ggtgcggcagcgggtgctggtgcggcgaccggtgcggcagcgggtgctggtgcggcgacc
ggtgcggcagcgggtgctggtgcggcgaccggtgcggcagcgggtgctggtgcggcgacc
ggtgcggcagcgggtgctggtgcggcgaccggtgcggccgctggtgctggtgcggcgacc
ggtgcggccgctggtgccgcgggtgccgcgaccagcgccgccgtggcgggtggggccgcg
acctccgcggtcgcttcgaccgtcgccgcgaccgcgggtgcgggcgcgatcctcggcggc
accagcatggctgcggctgcgggcgccgtcgcgatcgccgccgtcggcgtggtctcgatg
ctccaggccatcagcccgacgaccgacgccctcgggccgcccccgtcgacggtcgtcacg
gcgtcggcgtcgaccgcggctccgctcacccccggccccgccccgagcatctcgccgtcg
gacacgtcggtgctcggccaggtgttcctcctcggggagcccgcgcggctggtcgtcgcg
ccggtgggcacgggcactctccagccgcgcgtgccccagcgcgtgacgatgaaggtgctc
aacaagggtgagcagaccgcgcgcgacacgaccgtgcggctgagcctggccacgggcctc
gaccctgatctcgggtccgcgtccgtgggccgcagcgcgtcgctgctgtcgcccgacgca
ccgggctgcagcctgggggccgacggctccggcgacgtcctctgcgatctcggcgacatc
accggtggcgcggcggcgaccgtcgccttcgacgtgctcgcgcgcgacggtggcagctac
aagatcagcggcgagatctgggccgacggcatcctccggagtccggtcgacgtcccgccg
gccgcggtcgacccgttcggggcggagctcacggccgcctgggggacgatccccgatctc
gtcaacccaggcctcggcgacctgccgttgtccgtcaccaacacgggcgacgtcgacgcc
gcggcaggctggtcggtcgacgtcgcactgccggacggcctgctgctcgccggagcggac
ggcttgacgtgcgccgccgccgcggacgccccgcagtccgtgacgtgtaccgacccggac
gcggcgctctcgcccgacgcccaggtcgcggccgtgctgcacgtcgtcgcccccgcgacc
tcgggcgccggggcgatgcaggtcgacgcccggcctgtcgtcgccggcgggcacgcggtc
tcctcgagcggcaccttcacggtcgcgcggccgtggcacggcgcgcacgccgagaccggg
atcgccgcggtgtgcgcggcgacgggcggcgtcgggactgccgacgccaccgtccggggc
acctaccgcaacaccacccacctggcggtcaccgcccgcctcgacgcggccggcgggtcc
gcgacgtcgtcggtgctcacgccggggcagagcgcggacctcaccgtccacgacggcctg
cgcgtgccggcaggcaccggcacctggactctcacgacgacggtggccggcaccgagtac
tcgacgacgcttgcggccggccagttcgacgccgtcgactgctacgacccggtctgggac
gcgacgacgtcggcggccgtacagaacgtgggcgggacgttgcaggtggccggcaccatc
acgaacgacacggcggagccgttccgcgtcgcgctgcgggcggcgggggtcacgagcgac
ccggtcaccctcgacccgggcgcgaccacgaccctcgtgctcgacacgggcctcgcctcc
ctgcccagcggtgtcgcggagttcgacctgtaccgctgggtcgccgacgtcgacggcgac
ccgcccgtgcagggcgtcgtcccgcgcacccccgtgacggcggcgtacgccggtgcgacg
gtggcgccggctctcggcccgttgaccggcgacccggtgacgtctgcctgcacctacgat
cccgccgccgagacctcggtgcggcgggcgcgcatcccgctggacaacaccggctcgacg
cttcctgtgtcgttcacggtgggcggtgtgacggccgtcctgccggcgggcgcgtcccag
gtgctgaccgttccggtggcgtacgggacgacgtcgctcgacgtgctcgccgacgggcgg
acgatcggctcggtgccggtccgggtcgcgagctgcgcgacgctcgcctggccgcaggac
gtggccgtgacggcacaggcccagtgcacggcgcagcacctgcccgagctcctcgccacg
gtggccacccagggcgggcggtcctacgacgtccggatctcgcgcggggggcgcgcctgg
tccgacccggccccggtgaccccggccggcccggcgaccgtgcggctcggactcggcgac
ggcctcaccgcgcgcgggggacgggcgagcgtcgaggtgtcgcgcgtggtcgagggacgt
ccgctcacggcgtacacgacggtcgactacgccgctgtgagctgcgtcgtcaccgcaccg
gccgcgcgggtcgcgctcggcggcatcaccgtgaccgagacccctgacggccccgtctcg
acgcggactgcggcgctggtgctcgacaacaccggctcgaacgtgcccgtgtggttctcg
gtgcccgacgtggtgggcggctcggtgcgggtgccggccgggcagacccggacggtcgac
gccggcgtcgtcaccggcagcgcgggggcgacctaccgggtctcggcgcggtcgtggtcg
acgacgctcaccgtcgccccgttcaccggtaccgccggctggtgcgcccccgcctgggac
cgcgccacgcaggagagcggtggctacgcggcgggcgcgaaggtgagcttcggctcggcg
aactacacgtatcgcggtgcgcgcgtgaccgatcccgatcccgccgagggtgtcgccgac
gggtccgcgcgagcgaaccgcggcgcgggcgccgcgcacgggaacgacgcgcggggaagc
gacgcgcgcgggaacgacaggtcgggcggacacggcggtgcgtcccgtggcgctggcggg
gtgctggcaccgccgacggcgggcagcggctgggacgcggccggagcctgcgagacgcgc
tga
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