Yoonia algicola: AABB28_04520
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Entry
AABB28_04520 CDS
T10512
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
yag Yoonia algicola
Pathway
yag03030
DNA replication
yag03430
Mismatch repair
yag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AABB28_04520
03430 Mismatch repair
AABB28_04520
03440 Homologous recombination
AABB28_04520
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yag03032
]
AABB28_04520
03400 DNA repair and recombination proteins [BR:
yag03400
]
AABB28_04520
Enzymes [BR:
yag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AABB28_04520
DNA replication proteins [BR:
yag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AABB28_04520
DNA repair and recombination proteins [BR:
yag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AABB28_04520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
DEDDh_C
Rv2179c-like
DNA_pol_A_exo1
RNase_H_2
PAS
Phage_holin_3_6
Motif
Other DBs
NCBI-ProteinID:
WZU64552
UniProt:
A0AAN0M8E9
LinkDB
All DBs
Position
914277..915668
Genome browser
AA seq
463 aa
AA seq
DB search
MKNLSLRLRVFLFFCLVGLGSLLVTVIALWIGFRQLDQADALSAFVTSGVVAAFGIIGLA
AGVWLLFDDNVSKPIETIAAGLRVRAHVDVSTPIDVSTAKYLGDLAPAASAMGAVLKSVT
AARAEQDSQHLVQITKQRDQLVSILSDIPTAVILATTDHRIVLYDGQAAALLERVGTARL
KTSIFDYLEEDAILSALSELERKGASRLDITVKAHSGEAYSGHIRSFGTDAGYTLMLEPS
GLVAARPLTFDFELLYQKIPAELGDTPLQELVYVVFDTETTGLNPLKDEVVQLGAVRVVN
GQIVVGEVFETLVNPQIPIPQQSTNVHGIDQSMVANAPTFGDVCGRFNEFSRNAVFVAHN
AAFDMAFLHKQATKSGVHFDHPVLDTVLLSAAVFGGSAVHTLDAICARLDIVIPADQRHT
AMGDAVATAQALIAMIRILKGRGIATFGQLQTEIVKHRRVLKA
NT seq
1392 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaatctcagcctgcgcctcagggtctttttgttcttctgtctggttggtcttggc
agtctcttggtcacggtcatcgcgctctggatcgggtttcgccagcttgatcaggccgat
gcgctttcggcctttgtcacaagcggcgttgtcgctgcttttggaatcatcgggctcgcg
gcaggtgtctggctgttgtttgacgacaatgtcagcaaacccatcgagacaatcgccgcc
ggtctgcgggtgcgtgcgcatgtcgatgtcagtacgcccattgacgtcagcaccgcgaaa
tatctgggcgatcttgcccctgccgcctctgccatgggcgctgttctcaaaagcgtgaca
gcagcgcgcgcagagcaggacagccaacatcttgtgcagatcacaaagcagcgcgaccag
ctcgtcagtattctttcggatatccccacagcggtcatattggccacgacagatcaccgg
atcgttctttatgacgggcaggcggctgcattgctcgaacgggtcgggaccgcgcggttg
aaaacctcgatcttcgattatctggaagaagatgccattcttagcgcgctttctgagctg
gagcgcaaaggcgcttcgcggcttgatatcaccgtaaaggcccacagcggcgaggcgtat
tccggccatatccgcagtttcggcaccgatgcaggatataccctgatgcttgaaccctcg
gggctggtggccgcgcgcccgctgacctttgattttgaattactctaccagaagatcccc
gcagagctgggcgatacaccattgcaagagctggtttatgtggtttttgataccgaaacg
accggcctcaacccgctcaaagacgaggtcgtccaactgggtgctgtgcgtgtcgtcaac
ggacagatcgttgttggtgaagtgtttgaaacgcttgtgaacccccagatcccgatccca
cagcaatcgacaaatgtgcatgggatcgaccaatcaatggtcgcgaacgcgcctacgttc
ggtgatgtctgcggcagatttaatgaattttcgcgcaatgccgttttcgtcgcgcataac
gcggcattcgacatggcctttcttcacaagcaggcaacgaaatcgggcgtgcacttcgat
catccggtcttggacaccgtgcttttgtcagcggccgtttttggcgggtctgccgtccac
acgcttgatgcgatttgcgcgcgcttggatatcgtgatcccggcagatcagcggcacacg
gcgatgggtgatgctgtcgcaacggcccaagcgctgattgcgatgatccgcatcctcaag
gggcgcggcatcgcgactttcggtcaactgcaaactgaaattgtgaagcaccgcagggtt
ttgaaagcctga
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