Yoonia algicola: AABB28_07900
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Entry
AABB28_07900 CDS
T10512
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yag Yoonia algicola
Pathway
yag03420
Nucleotide excision repair
yag03430
Mismatch repair
Brite
Enzymes [BR:
yag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AABB28_07900
DNA repair and recombination proteins [BR:
yag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
AABB28_07900
MMR (mismatch excision repair)
Other MMR factors
AABB28_07900
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Other DBs
NCBI-ProteinID:
WZU65174
UniProt:
A0AAN0NK41
LinkDB
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Position
complement(1589705..1592098)
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AA seq
797 aa
AA seq
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MSSFSEDDAFEAAAVPLSQRAMARPSMAYLDGLNAAQREAVETLQGPVLMLAGAGTGKTK
ALTTRISHLLATGTARPHEILAVTFTNKAAREMKLRIGGLMGEAVEGMPWLGTFHAVCAK
QLRRHAELVGLKSNFTILDTDDQIRLMKQLIEAAGIDHKRWPARMLAGIIDGWKNKALTP
DQVPVADSGAFDHKGVELYAAYQRRLRDLNAVDFGDILLHMVTIFQKHEDVLDQYQRWFR
YILVDEYQDTNVAQYMWLRLLAASHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAH
VVRLEENYRSTPHILAAASGVIAANKGRLGKTLFTSREDGEKVRLIGHWDGEEEARWIGE
EVEAMQRGTRGMAPTGLDSMAILVRASHQMRTFEDRFLTIGLPYRVIGGPRFYERMEIRD
AMAYFRLAVSPEDDLAFERIVNTPKRGLGDKAVQTIQRTARSNGVSLVEGARLVCQGKLL
GGKGLKELTFLVASLDRWHGQVRAEADTHVELAEMILDESGYTGFWQNDKTPEAPGRLEN
LKELVKALENFDNLQGFLEHVSLIMDNETEEQGEKVSIMTLHAAKGLEFPAVFLPGWEDG
LFPSQRSMDESGMKGLEEERRLAYVGITRAEEICTVSFAANRRVYGQWQSAMPSRFIDEL
PQDHVEVLTPPGLYGGGYGAAGMAASASPAMAGMVGSDLHEKAHSADVYNSPGWRRLQSR
SQQRGMAMPSEARNMTIDMDAVSAFTEGERVFHQKFGYGEVIGIEGDKLVIEFDKAGSKH
VVAQYIVSADKADDVPF
NT seq
2394 nt
NT seq
+upstream
nt +downstream
nt
atgagcagtttttctgaagatgatgcctttgaggccgccgcagtgccattgagccagcgg
gcaatggcgcggccgagcatggcctatctggatggtttgaatgccgcgcagcgcgaggcg
gttgagactttgcaggggcctgtcttgatgttggcgggcgctggcaccggcaaaaccaag
gcgctgaccacgcgtatttcgcatctcttggcgaccggcaccgcccgcccgcacgagatt
ttggcagtgacttttaccaacaaagccgcgcgtgagatgaaattgcgcattggtgggctc
atgggtgaagccgtggaagggatgccgtggttggggaccttccatgcggtctgtgccaag
caattgcgccgtcatgccgaattggtgggcctgaaatcgaactttactattctggatacc
gacgaccagatccgcctgatgaagcagttgatcgaggctgcgggcattgatcacaaacgc
tggcccgcgcggatgctggcggggattattgatggctggaagaacaaggcactgacgccc
gatcaggtgcctgttgcggacagtggtgcgtttgatcacaagggggtggagctttatgcc
gcctatcagcgccgactgcgtgatctgaatgccgtcgattttggcgatatcctgctgcat
atggtcacgatttttcaaaagcacgaagacgtgctggaccagtaccagcgctggttccgc
tatattctggtggacgagtatcaggataccaacgtcgcccaatatatgtggctgcgcctg
ctggcggcatcgcacaagaacatctgttgtgtgggcgatgatgaccaatcgatctatggt
tggcgcggggccgaagtgggcaacattctacggttcgaaaaggattttcccggcgcgcat
gtcgtgcgattggaggagaattaccgctcgacgccgcatattctggccgctgcctctggc
gtgatcgccgccaataaggggcgtttgggcaaaacgctgttcacgtcccgtgaggatggt
gaaaaggtgcgactgatcggccattgggatggcgaggaagaggcgcgctggatcggggaa
gaggttgaagcgatgcaacgcggcacacgcggtatggccccaacgggccttgatagcatg
gcgatccttgtgcgcgcgtcgcatcagatgcgcacctttgaggaccggttcctgacgatt
ggtttgccctaccgcgtcatcggtggcccccgcttttatgagcggatggagatccgcgat
gcgatggcctatttccggctggccgtaagccccgaggatgatctggcgttcgagcgcatc
gtgaacacgcccaagcgtggtcttggcgacaaggcggtgcagacgatccagcgcacggcg
cgcagcaatggtgtgtcactggtcgaaggtgcgcgattggtctgtcagggcaagttgctg
ggtggtaaggggctcaaagagctgacgttcttggtggcctcactcgaccgttggcatggg
caggtccgcgccgaggccgatacccatgtcgagctggccgagatgattttggatgagagc
ggctataccggtttttggcaaaacgacaaaacgccagaggcgcccgggcggctggaaaac
cttaaggaactggtcaaggcgctggagaatttcgacaacctgcaagggttcctcgaacac
gtcagcctgatcatggataatgagaccgaagagcagggtgagaaggttagcatcatgact
ttgcacgccgcgaaaggtctggaattccccgctgttttcctgccgggatgggaagatggg
ctgttcccctcgcaacgctcaatggatgaaagcgggatgaagggcctcgaggaagaacgg
cgcttggcctatgtcgggatcacgcgcgccgaagagatttgcaccgtgtcattcgcggcg
aaccggcgggtatatggccaatggcagtcggccatgccgtcgcgatttattgacgagctg
ccgcaggatcatgtcgaggtgctgacgccgccgggcctttatggcggcggctatggtgct
gcgggcatggcggcaagcgcgtcaccggcgatggcgggcatggtggggtctgacctgcac
gaaaaggcgcatagtgcggatgtttataattccccgggctggcggcggttgcaatcgcgc
agccagcagcgcggtatggcgatgccatccgaggcgcgcaatatgacgatagatatggat
gccgtcagcgcctttacagaaggcgagcgcgtgttccatcagaaattcggctatggcgaa
gtgatcgggatcgaaggtgacaagctggtgatcgaattcgacaaagcgggatcaaagcat
gtggtggcgcagtatattgtgagcgctgacaaggccgatgacgtgccgttctag
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