Yoonia algicola: AABB28_10030
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Entry
AABB28_10030 CDS
T10512
Symbol
ihfB
Name
(GenBank) integration host factor subunit beta
KO
K05788
integration host factor subunit beta
Organism
yag Yoonia algicola
Brite
KEGG Orthology (KO) [BR:
yag00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yag03032
]
AABB28_10030 (ihfB)
03036 Chromosome and associated proteins [BR:
yag03036
]
AABB28_10030 (ihfB)
03400 DNA repair and recombination proteins [BR:
yag03400
]
AABB28_10030 (ihfB)
DNA replication proteins [BR:
yag03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
AABB28_10030 (ihfB)
Chromosome and associated proteins [BR:
yag03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
AABB28_10030 (ihfB)
DNA repair and recombination proteins [BR:
yag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
AABB28_10030 (ihfB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-CCDC81_euk_1
HU-HIG
Tim44
HU-CCDC81_euk_2
Motif
Other DBs
NCBI-ProteinID:
WZU62252
UniProt:
A0AAN0NDY9
LinkDB
All DBs
Position
complement(1982669..1982950)
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AA seq
93 aa
AA seq
DB search
MIRSELIQKLADENPHLYQRDVEKIVNTIFEEIIEAMARGDRVELRGFGAFSVKKRDQRI
GRNPRTGEAVEVDEKHVPFFKTGKLLRDRLNGN
NT seq
282 nt
NT seq
+upstream
nt +downstream
nt
atgatccgttccgaactgatccagaaactcgccgacgagaacccgcatctttatcaacgc
gacgttgagaaaattgtgaatacgatttttgaagagattatcgaagcgatggcgcgtggt
gaccgggttgagttgcgcgggttcggggctttctccgtgaaaaagcgcgaccagcggatc
ggccgcaacccacggacgggggaagcggtggaagtggacgaaaagcacgtgcctttcttc
aagaccggtaagttgctgcgcgaccgtttgaacggcaactag
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