Yoonia algicola: AABB28_14965
Help
Entry
AABB28_14965 CDS
T10512
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
yag Yoonia algicola
Pathway
yag03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yag00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AABB28_14965 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yag03019
]
AABB28_14965 (recQ)
03400 DNA repair and recombination proteins [BR:
yag03400
]
AABB28_14965 (recQ)
Enzymes [BR:
yag01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AABB28_14965 (recQ)
Messenger RNA biogenesis [BR:
yag03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AABB28_14965 (recQ)
DNA repair and recombination proteins [BR:
yag03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AABB28_14965 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
Rhodanese
Motif
Other DBs
NCBI-ProteinID:
WZU63142
UniProt:
A0AAN0M627
LinkDB
All DBs
Position
2946287..2948323
Genome browser
AA seq
678 aa
AA seq
DB search
MSTTTLLSDIFGFDAFRPGQQEIVEAVVAGENTLAIMPTGGGKSLCFQLPALVRGGVTVV
ISPLIALMRDQVRGLREAGVEAGALTSGNTPEETDAVWEALEAGTLKLLYMAPERLAAGG
TMNMLRRAGVGLIAVDEAHCVSQWGHDFRPDYLRIGELKRMLDVPLAAFTATADAETRDE
IVEKLFDGQQPATFLRGFDRPNIHLAFAAKDGPRNQILNFAGARKGQSGIVYCGTRAKTE
TLSKALADAGHSTCHYHGGMEADDRRIVERRFQQEDGLIVCATVAFGMGIDKPDIRWVAH
ADLPKSIEAYYQEIGRAGRDGDPAETLTLFGPDDIRYRRQQIDEGLAPPERRAADHGRLN
ALLGLAEALRCRRQNLLEYFGENPGPCGNCDLCDKPAEVFDGTTAVRMALSAALRTEEWF
GAGHLIDILLGTPTDKIMQRGHDSLPTFGVGKDYDKRQWQAIFRQMMGHDLLRPDRDRHG
ALRMTDHARPILRGEATIELRRDTIKAARGSGPKVRMLVSEEDAPLLSALKAKRRFLAEQ
ANAPAYIIFNDRTLIEMAEKRPMTLDQMAHIGGVGAKKLATYGQDFLTVIVGATEEVHPM
RRKLAGRDEGAVYDRLMQAQAVLTRGPHGADKPMSCSASMLAKVAQMRNADMDNLTRVIG
DKYAERFGEAFLEVLEAG
NT seq
2037 nt
NT seq
+upstream
nt +downstream
nt
gtgtccactacaacgcttctgagtgacatctttggctttgatgcctttcggccgggccaa
caggaaatcgtcgaagcggttgtcgcgggtgaaaacacgctagcgattatgcccacaggt
ggcggtaaatccctttgctttcaattgcctgccttggtgcgtggtggtgtcaccgtcgta
atctcgccactgattgcgttgatgcgcgatcaggtacgcggcctacgtgaagcaggggtt
gaagcgggcgcgctgacttctggcaatacccccgaagaaacagatgccgtctgggaagcc
ttggaggcaggcacgctcaaactgctctatatggcgccagagcggttggctgcaggtggc
acgatgaacatgctgcgccgtgccggtgtgggcctgatcgcggtggatgaggcgcattgc
gtgagccaatggggccatgatttccgccctgattacctgcgaattggtgagctgaagcgg
atgctggatgtgccgctggccgcgtttacggccacggctgatgcggaaacccgcgatgag
attgtcgaaaagctgtttgatggccagcaacccgctacttttctgcgtggttttgaccga
cccaacatccaccttgcctttgctgccaaagacgggccgcgcaatcaaatcctgaacttt
gctggtgcgcgcaaaggccagtctggtatcgtttattgtggcacacgcgccaaaaccgaa
acgctgtccaaggcactggccgatgcaggccatagcacctgccattatcacggcgggatg
gaggcggatgaccgccgcattgtcgaacgccgctttcagcaagaggatgggctgatcgtt
tgcgccaccgtcgcctttggcatggggatcgacaaacccgatatccgttgggttgcccat
gccgacctacccaaatctattgaggcctattatcaggaaattggccgcgccgggcgtgat
ggcgatcctgcggaaacactcacgctgtttggacctgatgatatccgctaccgtcgccaa
cagattgatgaggggctggctccacccgaacgccgtgccgccgatcatgggcgtttgaac
gcgctcttgggtctggcagaggcgctgcgctgccgtcgtcagaacctgctagagtacttt
ggcgaaaaccccgggccctgtgggaactgcgatctttgcgacaaaccggcagaggtcttt
gacggtaccaccgccgtgcgcatggcgctgtctgcggccttgcgcaccgaagaatggttt
ggcgcggggcatttgatcgacattctgttgggcacccccacagataagatcatgcagcgt
ggccatgatagcctgcctacctttggtgttggcaaggactatgacaaacgccagtggcag
gcgattttccggcagatgatggggcatgatttgctgcgtcctgatcgcgaccgacacggc
gcgttgcgcatgacagatcatgcgcgccccatcctgcgcggtgaggcgacgatcgagctg
cgccgcgatacgataaaggctgcgcgcggatcaggccccaaagtgcggatgctggtcagc
gaagaagacgcgccgctgttgtcggccctcaaggccaagcgccgctttctggcggaacag
gcgaatgcgcccgcctatatcattttcaacgaccgcaccttgattgagatggctgaaaag
cggcccatgacccttgatcagatggcccatatcggtggcgttggtgcaaagaaactggcg
acttatggacaggattttctgacggtaatcgttggtgcaaccgaagaggtgcacccgatg
cgccgcaaacttgcggggcgcgatgagggggcggtctatgatcggctgatgcaggcgcag
gcagtgttgacgcgtggcccgcatggcgcggataaaccgatgagttgttctgcctcgatg
ctggctaaggtcgcgcagatgcgcaatgccgatatggataacctgacccgtgtcattggc
gacaaatacgccgaaaggtttggcgaggcatttttagaggtgctagaagccggttaa
DBGET
integrated database retrieval system
