Yoonia algicola: AABB28_17695
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Entry
AABB28_17695 CDS
T10512
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yag Yoonia algicola
Pathway
yag03030
DNA replication
yag03430
Mismatch repair
yag03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yag00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AABB28_17695 (dnaE)
03430 Mismatch repair
AABB28_17695 (dnaE)
03440 Homologous recombination
AABB28_17695 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yag03032
]
AABB28_17695 (dnaE)
03400 DNA repair and recombination proteins [BR:
yag03400
]
AABB28_17695 (dnaE)
Enzymes [BR:
yag01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AABB28_17695 (dnaE)
DNA replication proteins [BR:
yag03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AABB28_17695 (dnaE)
DNA repair and recombination proteins [BR:
yag03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AABB28_17695 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HROB
RNase_II_C_S1
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
WZU63639
UniProt:
A0AAN0M2A3
LinkDB
All DBs
Position
3496726..3500223
Genome browser
AA seq
1165 aa
AA seq
DB search
MTADPRFIHLRVHTEYSLLEGAIPTKKLPGMIAAMGMPAVAVTDTNNMFCALEFSEGASK
AGVQPIIGCQLDVTFVAAEPGKRAEAPAPIVLLAQSEAGYMNLMKLNSCAYLDAQGQLPQ
VTLEELAQYHAGLICLSGGPDGPVGRLLRQGQRPKAEAFLDRLAAIYPDRLYVELQRHPG
DGLPEAERLSERGHIEMAYAKGLPLVATNDVYFPKTELYEAHDALICIADGAYVDQQEPR
RRLTPQHYLKSPQEMATLFADLPEAIENTVEIARRCAFKAYKRAPILPKFADDEVAELRR
QAQEGLKARLAVIPHAADVAEYEKRLEFELGIIEGMGFPGYFLIVADFIKWAKDQEIPVG
PGRGSGAGSLVAYALLITDLDPLRYSLLFERFLNPERVSMPDFDIDFCMDRREEVIRYVQ
DKYGRDKVGQIITFGALLSKAAVRDVGRVLQMPYGQVDRLSKMIPVEGVKPVSIEKALAD
EPRLREEAKNEEVVDRLLTYAQQVEGLLRNASTHAAGVVIGDRPLDELVPLYQDPRSDMP
ATQFNMKWVEQAGLVKFDFLGLKTLTVIQNAVELIRKTGRPLNQAADGTKLYDVLKGFEY
DIGAIPLDDEKSYALYSSAKTTAVFQVESSGMMDALKRMKPTCIEDIVALVALYRPGPME
NIPTYCEVKNGQKELESIHPSIDHILKETQGIIVYQEQVMEIAQVMAGYSLGGADLLRRA
MGKKIAEEMAKERPKFEDGAKANGVEPKKAREVFDLLEKFANYGFNKSHAAAYAVVSYQT
AWLKANHPVEFMAGVMNCDIHLTDKLGVYFQEVKKGLGIAYTPPCVNRSQATFDVKDQKL
VYALGALKNVGVEAMKLIVAGREDREFVNLFDFARRCDLKRIGKRPLEMLARAGAFDVLD
PNRRRVMMSLDALTAYSAAIHDQKSSNQVSLFGDAGEDLPEPRLMDGADWLPAERLAEEF
KAIGFYLSGHPLDDYMSALKRKQVLTLDEVIAKAERGACVVKMAGTVSGRQERKSARGNR
FAFAQLSDPTGQYEVTLFSDTLEAAREYLETGSQVVLTCEATMEADQLKLLGRSVGPVDA
VVADAGGAGLRVFIDGPEVIGSVASVLANAASGAVRASRGPIYFCLMNDDLPGEVELDLG
EEFPVNPQIKGALRSLGGVIEVEDA
NT seq
3498 nt
NT seq
+upstream
nt +downstream
nt
atgactgctgatccccgattcattcacctgcgcgtccacacggaatattcgttgctggaa
ggcgcgatccccaccaaaaaactgcccggcatgattgcggctatgggcatgcctgctgtg
gcggtcactgacaccaataacatgttctgcgcgttggagttttccgaaggggcatccaaa
gcaggggtgcagccgattatcgggtgccagctggatgtgacgtttgtcgccgcagaaccc
ggcaaacgcgccgaggccccggcaccgattgtgctgctggcccagtccgaggcggggtat
atgaacctgatgaagctgaactcttgcgcgtacctggatgcgcagggccagttgccgcag
gtgacgctagaggagctagcgcagtatcacgcaggcctgatttgtctgtccggtggtccc
gacgggccggtgggccggttgttgcgccaaggtcagcggcccaaggccgaggcgtttctc
gacaggctcgccgcgatctatcccgacaggctctatgtggaattgcagcgccatccgggc
gatggtttgcccgaggccgagcgtttgtcagagcgtggccatatcgaaatggcctatgcc
aaggggctgccgctggtggccaccaatgacgtctacttccccaagacagagctttatgaa
gcacacgatgcgctgatttgtatcgcggacggggcctatgtcgaccagcaagagccacgc
cgcaggctgacaccgcagcattatcttaaatcaccgcaagagatggcgacgctctttgcc
gatctgccagaggcgattgaaaacactgttgaaatcgcgaggcgatgtgcgttcaaagcc
tataaacgtgcgccgatcctgccgaagttcgccgatgacgaggttgctgaattgcgccgt
caggcccaagaggggctgaaggcgcgcttggctgtgatcccccatgccgctgacgttgcg
gagtacgaaaaacggctcgaattcgagcttggaatcatcgaaggcatggggtttccgggc
tattttttgatcgttgccgactttatcaaatgggcgaaggatcaagagattcccgtgggt
ccgggccgtggctccggtgcggggtctttggtggcctatgcgctgctcattaccgatttg
gacccgctgcgctattcgctgctgttcgaacgcttcctgaaccctgaacgtgtgtcgatg
cctgacttcgacatcgacttttgcatggaccgccgcgaagaggtgatccgctatgtgcaa
gacaaatacgggcgcgacaaagtcgggcagatcattaccttcggtgcgcttttgtcaaaa
gccgcggtgcgcgacgtgggccgtgttttgcaaatgccttacggtcaggtggaccggctg
tcgaagatgatccctgtggaaggtgtgaaacccgtttccatcgaaaaggcgctggctgac
gaaccgcgcttgcgtgaagaggcaaagaacgaagaggtcgtggaccgcctgctgacctat
gcgcagcaggtcgaagggttgttgcggaatgcctcgacccacgcagcgggtgtggtgatt
ggtgaccggcctttggatgaattggtgccgctttatcaggacccgcgctcggacatgccc
gcgacccagttcaacatgaaatgggtggaacaggccgggctggtgaagttcgactttctg
ggtttgaaaacgctgaccgtcattcagaacgcggttgagttgatcagaaagacggggcgt
ccgctcaatcaggcggcggatgggaccaagctctatgatgtgcttaagggatttgaatac
gatatcggggcgatcccgctggatgatgaaaaatcttacgcgttatactccagcgctaaa
accacggctgtgtttcaggttgaatccagcggtatgatggatgcgctcaagcgcatgaaa
ccgacctgtatcgaggatattgtggcgctggtggcgctttaccgccccggcccgatggag
aacattccgacttactgcgaggtgaagaacgggcagaaggagttggaatcgatccacccg
tcgattgaccacatcctgaaagaaacccaaggcatcattgtttatcaagaacaggtgatg
gaaatcgcgcaggtcatggcgggctattcgcttggcggtgcggatttgctgcgccgtgcg
atgggtaaaaagatcgccgaggaaatggccaaagagcgtccgaagttcgaggacggcgcc
aaggccaacggggtagagcccaagaaagcccgcgaggttttcgacctgttggaaaaattc
gccaactacggtttcaacaaatcccacgcggcggcctacgccgtggtcagttatcagacg
gcatggctcaaggccaaccatccggttgaattcatggccggtgtgatgaactgcgacatc
catctgacggataagctcggtgtctattttcaagaggtcaaaaaagggctggggattgca
tataccccgccatgtgtgaaccgcagtcaggcgacatttgatgtgaaagatcaaaagctt
gtctacgcgctgggcgctttgaagaacgtgggcgtcgaggcgatgaagctgatcgttgcc
gggcgtgaagaccgcgagtttgtgaacctctttgactttgcccgccgctgcgatctcaag
cggatcggaaagcgcccgctcgaaatgctggcgcgtgcgggggcgtttgatgtgctggac
ccgaaccgccgccgcgtgatgatgagcttggatgcgctgacggcttattctgctgcaatc
cacgatcagaaatcgtccaatcaggtctcgcttttcggggatgcgggcgaggatttgccg
gaaccgcgtttgatggatggtgcggactggttgcctgcggaacgtctggccgaagagttc
aaggcgattggtttttatctgtcgggtcatccgctggatgactatatgagcgcgctgaaa
cgcaagcaggtcctgacgctggacgaggtgattgccaaggctgaacgcggggcatgtgtg
gtgaaaatggccggtacagtttcggggaggcaggaacggaaatcggcccgcggcaaccgc
tttgcctttgcgcaactctctgatccgacaggacaatatgaggttacactattttcagat
acgttagaggccgcacgcgaataccttgaaaccggcagtcaggtggtgctgacctgcgag
gccacgatggaggccgatcagctcaaacttctggggcgttcggttggtcctgtggatgcg
gtggtcgccgatgcaggcggtgcggggctgcgtgtctttattgacgggccggaggtgatt
ggatcggtggcaagcgtgctggccaatgccgccagcggcgctgtgcgggcatcgcgtggc
ccgatctacttttgcctgatgaatgatgacctgcccggcgaagtcgagcttgatctgggc
gaggaatttccggtcaatccgcagatcaaaggggcgctgcgatccttgggcggggtgatc
gaggtagaggacgcctag
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