Yersinia aleksiciae: ACZ76_00545
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Entry
ACZ76_00545 CDS
T03994
Name
(GenBank) helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yak
Yersinia aleksiciae
Pathway
yak03420
Nucleotide excision repair
yak03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ACZ76_00545
03430 Mismatch repair
ACZ76_00545
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yak03400
]
ACZ76_00545
Enzymes [BR:
yak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACZ76_00545
DNA repair and recombination proteins [BR:
yak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ACZ76_00545
MMR (mismatch excision repair)
Other MMR factors
ACZ76_00545
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
Viral_helicase1
AAA_12
Rhamnogal_lyase
YflT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKP32147
LinkDB
All DBs
Position
complement(92792..94471)
Genome browser
AA seq
559 aa
AA seq
DB search
MMMQWQPSEGITPTPELMDIILCDQSVSVLAGAGAGKTELLAQKSNYLLQTGKCMWPKRI
LCLSYKKEAQENIKERVMKRCGQKGDRFDSYTFDAFFKSIVDRFKDVLSMDKRPLNSYDL
VFSSKESNGKDKLSFDLIRQLALEILKIRADIVDLFSLTYSHVFIDEFQDTRSDQYELIK
LLFKDKGTQLLAVGDINQSIMLWAGARKTVFEDCEKEFNTTKKLLVQNFRASDEIQEVLR
CFIHFVQNDVNFSPITRSVDSCTIHHYDNEFSEADDLANKIENFIASGIEEKEICVLAKQ
QSEQYTEKLRDKLTTKGIRNLDMSELQDVLKEPLGRIFSSLFKVCTSRSPSSYTELCDLY
LALHRVNHGDEKEDGLIKSLSDKIAENREKLINSANPDLFILCIKDIIKFFGVNKIMGRW
NQYKSTNYWDKLWSSLEQHLRYTVGATQSFKEAALMFQAENSVQIMNIHKCKGLEYKVVI
FLGLEDQAFWNYKKAKFENDCALYVALSRAKEKILVTTAENREHRVNNGYDNRNSKYQLV
KPIYSFLTSHCKFKSIWYP
NT seq
1680 nt
NT seq
+upstream
nt +downstream
nt
atgatgatgcaatggcaaccttctgagggtattacgccgacgccggagctaatggatatt
attctgtgtgatcagtctgtttctgtacttgctggtgcgggagcaggcaaaacggagctt
ctagctcagaaatcgaattacttgttgcaaaccggaaagtgcatgtggcctaaacgcata
ttatgcctttcttataaaaaagaggcgcaagagaatatcaaagagcgcgttatgaaaaga
tgtgggcaaaaaggtgatcgctttgactcatatactttcgacgctttttttaagagtatt
gttgaccgttttaaagatgttttatctatggataaaagaccattaaatagttatgatttg
gtgtttagttcaaaagaaagtaacggcaaggacaagttgtcatttgatctaataaggcag
ttggctttagagatcttaaaaattagagctgatattgttgatctattttctttaacctat
tcacacgtttttatcgacgagtttcaagatacacgctctgaccagtacgagttgattaaa
cttctttttaaagataaaggaacacaattgctggctgtgggcgatataaaccaaagtatc
atgctatgggcaggtgctagaaaaacagtatttgaagattgtgaaaaagagtttaatact
accaagaaattattggtacaaaattttagggccagtgatgaaattcaggaagtattgaga
tgttttattcactttgtacaaaatgatgttaatttttcaccaataactcgaagtgtagat
agttgcactattcatcattatgacaatgaattttctgaggctgatgatcttgctaataaa
atagaaaattttattgcatctggcatcgaagaaaaggagatttgtgtactggctaaacag
cagtcagagcaatatacagaaaaacttcgagataaacttacgacaaaaggaattagaaat
cttgatatgtcggaattacaagatgtactaaaagagccattagggagaatattttcctca
ctttttaaagtttgtacatcacgatcaccttcaagctacaccgaactttgtgatttatac
cttgccttacacagagttaaccacggcgatgaaaaagaagatggcctgattaagtcattg
tcggataaaatagcggaaaatagagagaaattaattaactcggccaatccagacttattt
atcttatgtattaaagatattataaagttttttggtgtgaacaaaatcatggggcgatgg
aatcagtataaatccactaattattgggataaactctggagtagccttgagcaacattta
cgctacacggtaggtgcaacgcagtctttcaaagaagccgcattaatgtttcaggctgaa
aactccgtgcagattatgaatatacataagtgcaaggggttggaatataaagtggttatt
tttctaggtttagaggatcaggcattctggaactataaaaaggcaaagtttgagaatgac
tgtgctctctatgtggcattatcaagagcgaaggagaaaatattagtaacaacagctgaa
aatagagaacacagagtgaataatggatatgataatagaaactctaaatatcaattggtt
aaaccaatttattcatttttgacttcgcattgtaagtttaaatctatatggtacccatga
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