Yersinia aleksiciae: ACZ76_04785
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Entry
ACZ76_04785 CDS
T03994
Symbol
recB
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
yak
Yersinia aleksiciae
Pathway
yak03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yak00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
ACZ76_04785 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yak03400
]
ACZ76_04785 (recB)
Enzymes [BR:
yak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
ACZ76_04785 (recB)
DNA repair and recombination proteins [BR:
yak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACZ76_04785 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKP32906
LinkDB
All DBs
Position
complement(1007954..1011565)
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AA seq
1203 aa
AA seq
DB search
MTSMTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGGAAFSRPLMVEDI
LVVTFTEAATEELRGRIRDNIHELRIACVRGVSDNPMHKALLAEIIDLSEAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEQTLVQDELPLRRQACADFWRRHCYPLPLAV
ARAVSQEWSGPEALLKDLSAYLQGETPKFRQAPGDDETILSRHQQIVVQIDAVKAQWCAA
APELEALISISGVDKRSYSARYLPNWLEKVGAWADQETGDYQLPKELEKFRQSVLFEKTK
KGTAPQHALFSAIDSLFEQPLTLRDLILARAISEIRTSVQQEKRQRAELGFDDLLSKLDV
ALQQSGGELLAQSIRNRYPVAMIDEFQDTDPQQYRIFHTLYGGQKECGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLETNWRSSFPMVQSVNRLFSLVEVPFLFEQIPFIKVSA
AEKNSHLSFEIKGKKQPAISFWLQPGEGVGVSEYQQLMARQCAAQIRDWLTAGQNGQAQL
VTADGSRPVQASDITILVRSRAEAALVRDAMSALAIPSVYLSNRDSVFDTAEAKDLLWLL
QAVLAPEQERALRSAMATGMLGLDAKILDALNHDERAWDALVEEFDSYRQHWQRRGVLPM
LREIMAHRHLAENLLATPGGERRLTDVLHLGELLQEAASQLDSEHALIRWLAQQIAQPNH
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVGNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSVGIAPLIKGGRKKQGESDMHRSALGY
LVQQGQAGDAQYLADKLAELTAAAKGDISVSLAERPDDTPWQPQPEILPALAARQFNRQI
QDYWRVTSYSGLQQHGSSKGGASQTLNVPLQELLPRLDTDAVGEQVLIATAHLTPHTFPR
GAAPGTFLHDLLEPMDFSQPIEQEWLAEQLQRQGFGEQWLPMLSQWLNDIVQVPLNTTGV
TLAGLTPESKQAELQFYLPIDTLLRASELDSLIKHYDPLSRQCPVLDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTREAMTQAMAEHRYDLQYQLYTLALHRYLRHRLA
DYDYQRDFGGVIYLFLRGVNKQHPGNGIFSCRPELELIEGMDCLFSGREINDNAIQVDER
ASL
NT seq
3612 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgactccccagcggctggagccgctaacgctccccttatatggcgagagg
ctaattgaagcttctgccggaacgggtaagacttttaccattggggtactttatctaagg
ttgctgcttggcttggggggaggggctgcgtttagtcgccctcttatggttgaggatatc
ctggtggtgacctttaccgaagccgcaactgaagagttaagagggcgaatccgcgacaat
attcatgagttgcgtatcgcctgcgtgcggggagtcagcgataacccaatgcataaggct
ttattagccgaaatcattgacttaagtgaggccgcagcacaattgctggcggctgagcgc
cagatggatgaagcggcgatttataccattcacggcttttgtcagagaatgctggcgaat
aacgcttttgaatctggcattttgttcgagcaaacattggtgcaggatgaactgccactg
cgcagacaagcttgcgccgatttctggcggcgtcactgctatccgctccccttggctgtg
gctcgagctgtcagtcaggagtggagcgggccagaagcattactcaaagatctctctgcc
tatctacagggtgaaacgccaaagtttcggcaagcgcccggtgatgatgaaacgatactc
agtcggcatcagcaaatcgtggtgcaaattgacgcggtcaaagcacaatggtgtgccgcc
gcgcctgagttagaggcattgatcagcatctcaggtgttgataagcgcagctacagcgcc
cgatatttacccaactggctggaaaaagtcggtgcatgggcagatcaggaaacgggtgat
tatcagttacctaaagagctggaaaaattccgccagtcagttttatttgagaaaactaaa
aagggtacagcgccacaacatgccctatttagtgccatagacagcctattcgagcaaccg
ctgacactaagagatttgattttagcccgagcgatcagtgagatacgaacatccgtccag
caggaaaaacggcaacgggcggagctgggatttgatgacctgctcagcaaactggatgtg
gcattacagcagtcgggtggtgagttgttggcccaatctattcgtaaccgttatcccgtc
gcaatgattgatgagtttcaagataccgatccccaacaataccgcatcttccacacgctt
tatggtggacaaaaagagtgcggtctattactgattggtgaccccaaacaggctatttat
gctttccgtggtgcagatatatttacctatatccgcgcccgttctgaagtaagcgcccac
tacacactagagacaaactggcgctcctccttcccgatggtgcaatcagtgaaccggcta
tttagtttggtcgaggtgcctttcctgtttgaacaaattccttttataaaggtatctgct
gcggaaaaaaacagccatttatcttttgaaattaaaggaaaaaaacagccagccatctct
ttttggttgcagccaggagagggtgtcggagtgagcgagtaccaacaattgatggcgcga
cagtgtgcagcccaaatccgtgactggttaaccgctggccaaaatgggcaggcccaatta
gtgacagccgatggatcaaggccagttcaggcatctgatatcactattttggtacgcagc
cgggcagaagctgcattagtgcgtgatgcaatgagtgcattagccatcccatcggtttat
ttatccaaccgtgacagtgtgtttgataccgcagaggccaaagatctgttgtggttgttg
caggctgttttggctccagagcaggagcgggcattgcgcagtgcaatggcgacaggaatg
ctcggactggatgcaaaaatattggatgcattgaatcacgatgagcgtgcatgggatgct
ttggttgaggagttcgatagctatcgccaacattggcagcgccgtggtgtactgcccatg
ttgcgggagattatggctcaccgccatttagctgaaaacctgcttgcgacaccgggtgga
gagcgtcgactgacggatgtgctgcatttgggggaactattgcaagaagccgcatcacag
cttgatagtgagcacgcacttatccgctggttggcacagcaaatagcgcaacccaatcat
cagtcagataatcaacaactgcgcttggaaagtgaccgccatttggtgcaggttattaca
atccataaatcgaaagggttggaatatccgttggtttggctgcctttcgttggcaatttc
cgccagcagcaggatgtgctgtaccacgatcgccacagctttgaggctctgcttgatctg
aatgcagatgaagagagccaggctctggctgaagaggaacggctggcagaggatttacgg
ttactctacgtggcactgacccgtgcggtttatcattgcagtgtgggtattgcgccgctg
attaaaggcgggcggaaaaagcagggcgaaagtgacatgcaccgcagcgcattaggttat
ctggtgcaacaggggcaggcaggtgatgcacaatatttggccgataaattagcagaacta
acagcggcagcaaaaggcgatatttctgtatcactggcagagcgcccggacgatacgcct
tggcagccacaaccggaaattttaccagcacttgctgcgcgccaatttaaccggcaaata
caggattattggcgtgtcaccagctattctggcttacagcagcatggctcaagtaaaggt
ggtgcttcacagaccctaaatgtgccgctacaagaattacttccacggctggataccgat
gctgttggtgagcaggtattgatagccacagcgcatttaaccccacatactttcccacgc
ggcgcagcaccgggaactttcctacatgacttactcgagccaatggattttagtcagcct
attgagcaagagtggttggcagagcagttgcagcgacagggttttggtgagcaatggctg
ccaatgttgtctcagtggctaaatgacattgtacaagttccgctcaataccacgggtgtg
acattggctgggttgacgccggagagcaagcaggccgaattacaattttatctgccaatc
gatacgctgctgcgcgccagtgaattagattccttaatcaaacactatgacccgctctct
cggcagtgcccagtgctggattttcagcaagttagagggatgcttaaggggtttattgac
ttagttttctgctggcagggtaagtattacttattggattacaaatcaaattggttgggt
gaggacagtagcgcctatacccgagaggcgatgactcaagccatggctgagcatcgttat
gaccttcaatatcagctctatacactggcattgcaccgctatttgcgccaccgattggca
gattatgactatcagcgcgattttggtggcgtcatttacctcttcctacgtggtgttaat
aagcaacatccgggcaacggtatctttagttgccgccctgagctggaattgattgaagga
atggattgtttgtttagtggtcgtgaaataaatgataatgctatccaagtagatgagagg
gcctcactatga
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