Yersinia aleksiciae: ACZ76_10245
Help
Entry
ACZ76_10245 CDS
T03994
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
yak
Yersinia aleksiciae
Pathway
yak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACZ76_10245
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yak03019
]
ACZ76_10245
03400 DNA repair and recombination proteins [BR:
yak03400
]
ACZ76_10245
Enzymes [BR:
yak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ACZ76_10245
Messenger RNA biogenesis [BR:
yak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACZ76_10245
DNA repair and recombination proteins [BR:
yak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ACZ76_10245
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Peptidase_S66
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
AKP33894
UniProt:
A0ABN4H6P6
LinkDB
All DBs
Position
2273475..2275307
Genome browser
AA seq
610 aa
AA seq
DB search
MSTAAVINRELLAVQVLRDTFGYQQFRPGQQEIINATLSGQDCLVVMPTGGGKSLCYQIP
ALVTDGLTLVVSPLISLMKDQVDQLLAYGVGAGCLNSSQTREQQLAVMDGCRSGQIKLLY
IAPERLVMESFLDQLHQWRPALLAVDEAHCISQWGHDFRPEYRALGQLKQRFPNLPVIAL
TATADEATRGDIVRLLNLDQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAVLLYDPADMAWLRRCLEEKPAGAQ
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQQSCGNCDICLDPPKRYDGLADAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIREFGHDKLSVYGLGREQSHEHWVSVLRQLIHLG
LLSQNIAQFSALQLTEAARPVLRAELPLQLAVPRIQSLKVRSSANQKSYGGNYDRKLFAK
LRKLRKSIADEGNIPPYVVFNDTTLLEMAEQMPITASELLSVTGVGQRKLERFGASFMAM
IRDHVDNNDD
NT seq
1833 nt
NT seq
+upstream
nt +downstream
nt
gtgtcgaccgcagcagtgataaatagggaattactggccgtgcaagtattgcgagatact
ttcggctatcagcagttccggcccggacaacaggaaattatcaacgccaccctatcagga
caagactgtctggtcgtgatgccaacgggcggtggtaagtccttgtgttaccagatcccg
gcactggtgaccgacgggctaacgctggtggtatctcccttaatttccctgatgaaagac
caggttgaccaactgctggcctatggcgtgggtgcggggtgcttaaactcatcacaaacg
cgcgagcagcaattggcggtgatggacgggtgccgcagtggtcagattaaactgctgtat
attgcgccagagcggctggtgatggagagttttctcgatcaactgcatcaatggcgtcct
gcgctgttagccgtggatgaagcacactgcatctcccaatggggtcacgacttccgcccg
gaataccgcgcccttgggcagcttaagcaacgtttccccaatctacccgttatcgctcta
accgccacggctgatgaagccacacggggcgatatcgtgcgtttactcaatctggatcag
ccactgattcaggttagcagctttgaccgcccgaatatccgctacaccttggtagagaag
ttcaaaccgctcgatcaattgtggcgctttgtccaagaccagcgcggaaaaagtggcatt
atttactgcaacagccgcgccaaagtggaagacaccactgcccgtctgcaaagccgtggc
ttgagtgtcgccgcttaccacgcggggctggataacgaacggcgcgcacaggtgcaggaa
gctttccaacgtgatgacttgcaggtggtggtcgctaccgtggccttcggcatggggatt
aataagcccaacgtccgctttgtggtccattttgatatcccacgtaccatcgaatcctac
tatcaggagacgggacgtgctgggcgtgatggtttacccgccgaggcggtgctgctgtat
gacccggctgacatggcgtggttgcgccgctgtctggaagagaaaccggcgggtgcgcag
caagatatcgagcggcataaattaaacgccatgggcgcgtttgctgaagcgcaaacctgc
cgtcgattagtgctgctcaactattttggtgagggtaaacagcagtcgtgcggcaactgc
gatatctgtctcgatccgcccaagcgttacgatggcctggctgatgcacaaaaagccctc
tcttgtgtttaccgcgttgggcagcgctttggtttgggttatatcgtcgaagtgctacgt
ggggccaataaccagcgcatccgcgagtttggtcatgacaaactctcggtgtacggtttg
ggtcgcgagcagagccacgaacactgggtcagtgtattgcgccaactgattcatctgggg
ctactgagccagaatattgcccagttttcagccttacaattgaccgaggccgcgcgtccg
gtattacgtgctgaattgccgctgcaactggcggtgccgcgtattcaaagcctgaaggtg
cgcagcagcgccaatcagaaatcctatggcggcaactacgatcgcaagttgtttgccaaa
ttgcgcaaattgcgcaaatctatcgctgacgaaggcaatattccgccttatgtggtgttt
aacgatacgaccttgctggagatggcagaacagatgccgattactgccagcgaactgttg
agtgtcacgggtgtggggcaacgcaaactcgagcgctttggtgcgtcgtttatggcaatg
atccgcgaccatgtcgacaacaacgatgattaa
DBGET
integrated database retrieval system
