Yersinia aleksiciae: ACZ76_11495
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Entry
ACZ76_11495 CDS
T03994
Name
(GenBank) polynucleotide phosphorylase/polyadenylase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yak
Yersinia aleksiciae
Pathway
yak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACZ76_11495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yak03019
]
ACZ76_11495
03016 Transfer RNA biogenesis [BR:
yak03016
]
ACZ76_11495
Enzymes [BR:
yak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
ACZ76_11495
Messenger RNA biogenesis [BR:
yak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
ACZ76_11495
Transfer RNA biogenesis [BR:
yak03016
]
Prokaryotic type
tRNA degradation factors
ACZ76_11495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
RNase_PH_C
S1
KH_1
KH_2
S1_2
OB_RRP5_4th
aRib
KH-I_KHDC4-BBP
UPF0181
S1_RRP5
Motif
Other DBs
NCBI-ProteinID:
AKP34115
UniProt:
A0A0T9T2K5
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All DBs
Position
2537793..2539913
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AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQVNPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADILSEDQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWHAEPVNE
ALHARVAELAEARLGDAYRITEKQERYTQVDAIKADVTEALLAQDESLNASEIQDILGDV
EKNVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYCVGETGMVGSPKRREIGHGRLAKRGVLAVMPSPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKENENFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVNRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVE
KVTDYLQMGQEVPVKVMEVDRQGRIRLSIKEATTPDAEAPAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggccaacataccgtaaccatcgaaacg
ggcatgatggctcgccaggcaactgctgctgttatggtaagcatggacgacaccgcagta
ttcgtgactgttgttggccaaaagaaagctaaaccaggtcagagcttcttcccgctgacg
gttaactatcaggagcgtacttacgctgctggccgtatcccaggcagcttcttccgtcgt
gaaggccgcccaagtgaaggcgaaacactgacctcacgtctgattgaccgtccgattcgc
ccattgttcccagatagcttcctgaatgaagttcaggtgattgcgactgttgtttctgtt
aacccacaagttaacccagacatcgtggcactgattggtgcatcagctgcgctgagcctg
tcaggcattccattcaacggcccaatcggcgctgctcgcgttggtttcatcaacgaccag
tatgtgctgaacccaacaacggacgaactgaaagagagccgtctggacttggttgttgct
ggtactgcgggcgcagtactgatggttgaatctgaagcagacattctgtctgaagatcaa
atgttgggcgcggtggtcttcggccacgagcaacaacaagttgtgattgaaaatatcaac
gctctggttgccgaagcgggcaaaccgaagtgggattggcatgctgagccagttaacgaa
gcgctgcacgcgcgcgttgctgagctggctgaagctcgtctgggtgacgcatatcgcatc
actgagaaacaagagcgctatactcaagttgatgctatcaaagcagacgtgactgaggcg
ttgctggcacaagacgaatctttgaatgcgtctgaaattcaggacattctgggcgatgtt
gagaaaaacgtcgttcgtagccgcgtattgcgtggcgaaccgcgtatcgatggtcgcgaa
aaagacatgatccgtggtctggatgtgcgtactggcgtattgccacgtacccatggttct
gcgttgttcacccgtggtgaaactcaggcactggttactgccacactgggtactgcacgt
gacgcgcaaaatattgatgagctgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattgcgttggtgaaactggtatggttggctcacctaaacgtcgtgag
attggccatggccgtctggcgaaacgtggtgtgttggcagttatgccaagcccgagcgag
ttcccttacactgttcgtgtggtttctgaaatcaccgaatctaacggttcttcctcaatg
gcttctgtttgtggtgcttccttggccctgatggatgctggcgtgccaattaaagccgct
gttgcgggtatcgcgatgggtctggttaaagaaaacgaaaactttgtggttctgtccgac
attctgggtgacgaagatcacttgggcgacatggactttaaagtggccggtagccgtgac
ggtatcaccgcattgcagatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gtggctctgaaccaggccaagggtgcgcgtctgcacattctgggtgttatggaacaggct
atcagcacacctcgtggtgatatctctgagtttgctccacgtatctacaccatgaaaatc
aatcctgagaaaatcaaggatgtgatcggtaaaggcggttctgtgattcgtgcgctgact
gatgaaacgggcaccacgatcgaaatcgaagatgatggtaccattaagattgcagctacc
gatggcgacaaagcaaaacacgctattcgtcgcatcgaagaaattactgctgaaatcgaa
gtgaaccgtatctatgcgggtaaagtgactcgtatcgttgatttcggtgcatttgtggca
atcggcggcggtaaagaaggtctggttcatatttctcaaatcgctgacaagcgcgtagag
aaagtgacagactacctgcaaatgggccaagaagtgccagttaaagtaatggaagttgat
cgccagggccgtatccgcctgagcatcaaagaagccacgactcctgacgcagaagctccg
gcaccagaagcagcagagtaa
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