Yersinia aleksiciae: ACZ76_11505
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Entry
ACZ76_11505 CDS
T03994
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
yak
Yersinia aleksiciae
Pathway
yak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACZ76_11505
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yak03019
]
ACZ76_11505
03009 Ribosome biogenesis [BR:
yak03009
]
ACZ76_11505
Enzymes [BR:
yak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
ACZ76_11505
Messenger RNA biogenesis [BR:
yak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
ACZ76_11505
Ribosome biogenesis [BR:
yak03009
]
Prokaryotic type
rRNA helicases
ACZ76_11505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_C
ResIII
CMS1
AAA_30
Cas3-like_C_2
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AKP34117
UniProt:
A0A0T9T2F4
LinkDB
All DBs
Position
2541107..2543101
Genome browser
AA seq
664 aa
AA seq
DB search
MTTELETSFADLGLSAPILSALTSLGYEKPSPIQLECIPHLLNGRDVLGMAQTGSGKTAA
FGLPLLHNIKAELKAPQVLVLAPTRELAIQVAEALSSFSKDINGVNVVALYGGQRYDVQL
RALRQGPQIVVGTPGRLLDHLKRGTLNLSNLSGLVLDEADEMLRMGFIEDVETIMAQIPA
EHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSFWRVGGGYNKKEALVR
FLESEDFDAAIIFVRTKNATLEVAEALERSGYSSAALNGDMNQSLREQTLDRLKDGRLDI
LIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLLQ
NIERTMKLTIPEVQLPNAELLGERRLAQFAAKVGQQLESSDLDLYRALLAKLQPEEEFDL
ETLAAALLKMAQGERPLILPPEAPRRPQREFNSRDDRGSDRGNDRGRDRGDSRREPRADS
RDGGERPARRERRDVGEMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFASH
STIELPKGMPGEMLSHFTRTRILNKPLNMQLLGDAQPHERRERPAGGNGGEQRRGGPRSA
GGERRDGAGAPPRRSFGSDRAPAGNGGGERRGSRDGQRSAAPRRDDAAAPAAAAAPARRR
FGDA
NT seq
1995 nt
NT seq
+upstream
nt +downstream
nt
atgactactgagcttgaaacctcttttgctgatctggggctgtccgctcctattctttcc
gctctaactagccttggttatgaaaaaccatcgccaatccagttagaatgtatcccacac
ctgttaaacggccgtgatgttctcggcatggcgcaaacaggcagtggcaaaacagccgcg
tttggtctgccgctgttacacaatattaaagctgagctgaaagcgccacaggttctggta
ttagcaccgacccgtgagttggctattcaggtcgctgaagcactgtctagcttctctaaa
gacattaatggcgtcaacgtcgtggccctgtacggcggccagcgttatgacgttcaatta
cgcgctttgcgccaaggtccacaaattgttgttggtaccccaggtcgtctgttagatcac
ctgaaacgtggcacccttaacttgtccaacctgagcggtttagtgttggatgaagcagat
gaaatgctgcgcatgggctttatcgaagacgttgaaactatcatggcgcagatcccggct
gaacatcagaccgcgctgttctctgcaaccatgccagaagcgattcgtcgcattacccgt
cgcttcatgaaagacccgcaggaagtgcgcattcagtctagcgtgacaactcgtcctgac
atcagccagagtttctggagagtgggtggcggttacaacaaaaaagaagctttggttcgt
ttcttggaatctgaagatttcgacgcagccatcatcttcgtgcgtaccaaaaacgcgacg
ctggaagttgcagaagccttggagcgcagtggttatagcagcgctgcactgaacggcgat
atgaaccagtctttacgtgagcagacactggatcgcctgaaagatggccgtctggatatt
ctgatcgcaactgacgttgctgcacgtggtttggacgttgagcgtatcagcctggttgta
aactatgatatccctatggattcagagtcttacgttcaccgtatcggccgtactggccgt
gctggccgtgccggtcgtgcgttgctgttcgttgagaaccgtgaacgtcgcttgttgcag
aacattgaacgcaccatgaagctgaccattccagaagttcagttgccaaatgcagaattg
ctgggcgaacgtcgcttagcgcagtttgctgctaaagtcggccaacagctggaaagcagt
gatttagatctgtaccgtgcattgctggctaagcttcaaccagaagaagagtttgatctc
gaaactctggctgctgcgctgctgaaaatggcacagggcgaacgtcctctgattctgcca
ccagaagcaccgcgtcgtccgcaacgtgaattcaattcccgtgatgaccgtggtagcgat
cgtggtaatgatcgtggccgtgatcgtggtgatagccgtcgtgagcctcgtgctgacagc
cgtgatggtggcgagcgtccagcacgtcgcgaacgtcgtgatgttggtgagatggagctg
taccgcattgaagtgggccgtgatgatggtgttgaagttcgtcatatcgttggcgctatc
gctaacgaaggcgatatcagcagccgttatatcggtaacatcaagctgtttgcttctcac
tccactatcgagctgccaaaaggtatgccgggcgaaatgctatctcacttcacccgtacc
cgtatcctgaataagccgctgaacatgcagctgttgggtgatgcacagccacacgaacgt
cgtgagcgtccagctggcggtaacggtggtgagcagcgtcgtggcggtcctcgttccgcc
ggtggcgaacgtcgtgatggcgcaggtgctcctcctcgtcgttcattcggcagcgatcgt
gctccagccggtaatggcggtggcgaacgtcgtggtagccgtgatggtcagcgttcagct
gcaccacgtcgtgatgatgccgctgcaccagcagcagcagcagcgccagcgcgtcgtcgt
ttcggtgatgcataa
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