Yersinia aleksiciae: ACZ76_13790
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Entry
ACZ76_13790 CDS
T03994
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yak
Yersinia aleksiciae
Brite
KEGG Orthology (KO) [BR:
yak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yak03400
]
ACZ76_13790
DNA repair and recombination proteins [BR:
yak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
ACZ76_13790
Archaeal homologous recombinant proteins
ACZ76_13790
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
AAA_21
cobW
SMC_N
nSTAND3
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
AKP34525
LinkDB
All DBs
Position
complement(3084291..3087980)
Genome browser
AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSHNELMTRHTAESLAEVEFEVKDTRYRAFWSQRRAKNSPEGNLQAPKVELALCES
GKILADKVRDKLDMVAEITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKQAKTDLDALHQRASGIELLNEEQRSALSQQIDELSQQEKQLAAEQSV
NPQQISWLTHWQQQQKSALEYQQQQKLIEQAFEQAQPELQRLARSEPAEKLRPLLRECSR
SRQDLQQIQLRITTLTQQQQQLQTQLTPLAEALEQANLARQQQAVKQHEQETLIEQKVVP
LDNTIAQQQHTLAQLATQLQQLQGKEQQERQQLALNEQQRLQTHQRLQQLAEYARQHPHH
QHWEKNLPLWREQFRQLHILQQQSVESEQQLQQQVTLLNTLQQQITTLNEQDKQQQATLI
QATSQAGSLQQQLLALEQQQPSAQLRQQWGELQQQRATRQQLAALSPLAQQVQSLLDKQQ
QQFVSQQQQLKLLEQQLAEKRQLYKQQKQHLTDLESLWEREKQIAGLEAERAKLQSGKAC
PLCGALDHPAVTEYQAVQPSETAKRVEELRLQVDQLFAAGTELRTQVESVQQQQQRLEQE
VQQNSQQLADYKKLWQKLAQPLALTFALNEPAALATWLEQQEQLEQNCQQQLAEYERLNQ
QHQQAKDVLAQAEQQQQKHLQQLALITQRQQDTQQSHQTLLAQHQRQQDELALMRQGFHN
ALAELSLSTPGTDQQQSWLTQREEESQRWQQYQQEQQQRVLEQKALETRIEDERRHLQAY
VDQLTELTQQHQQTETLLQQYHQQRHELFGDSRVSEARQLLRLQQQQVDLVQQNAAEALQ
LAQSQLSRLSGELEGLEQQYLHNQQRVAAAQAELQQALEISEFTDEAALTAALLSEEERQ
HLQQLQLQLNERQQQIHIRQQQTNEALEQHLQQCPSGVDRTSELAVLQLQSEQLLAQLKT
NTLRQGELRNQLESDVARRNNQHALFEQIERSQQQYDDWSYLNQLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYLLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGVSRLDNIFRVNPD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagcctgcgcctaaaaaacattaactccctacaaggggagtggaagata
gatttcactgctgagccattcgccagcaacggcttattcgccatcaccggccccactggc
gcggggaaaaccacgctactggatgcgatttgccttgcgctgtaccaccaaacgccgcgc
ctaaatgtcacgccgagccacaatgagttgatgacacgtcataccgccgagtcgctggcc
gaagttgaatttgaggtgaaagacacccgctatcgcgcattttggagtcaacgtcgcgct
aaaaacagccccgaaggaaatctgcaagcgcctaaagttgagttagcgctttgcgaaagc
ggcaagattctggccgataaagtgcgtgataagctcgatatggttgctgagataaccggg
ctggattttggccgttttaccaaatccatgatgttgtcacaggggcaatttgccgcattc
ctcaatgccgacgccaatgatcgtgctgagttattggaagagttaacgggtactgacatc
tatgggcggctatctgaacatgtttttgaacaacacaagcaggccaaaaccgatctggac
gccttacaccagagggcaagcggcattgagttactaaatgaagagcagcggtcagctcta
tcgcaacaaatagatgaacttagccaacaagagaagcaacttgccgcagaacaatcggtg
aatccgcagcaaataagctggctaacccattggcagcagcagcaaaagagtgcgctggaa
tatcagcagcaacaaaaactgattgagcaagcattcgagcaagctcagccggaattgcag
cgactagcccgaagtgaacctgctgaaaaactgcgtcccttgctgcgggaatgctcacgc
agtcgacaagacttgcagcagatacaattgcgtatcaccacactgacccaacagcagcag
caacttcagactcaactgacaccactggctgaagcgttggagcaagctaatttggctcgc
cagcagcaggcggtgaaacagcatgaacaagaaacgctgatcgaacaaaaagtcgtcccg
ctggataacacgattgcgcagcagcagcacacgttggcgcaacttgctacgcagttacaa
cagttacagggcaaagaacagcaagagagacaacagcttgcactcaatgagcagcaacgg
ctacaaactcatcagcgcctacaacaattggctgaatatgcgcgccagcatccccatcat
cagcactgggaaaagaacctgccgttatggcgtgaacagttccgccaactgcatatactg
caacagcagtcagttgagagcgaacagcagctacaacaacaggtcacgctgctcaatacg
ttacaacaacaaattactacgctgaatgagcaagacaaacaacagcaagcaacattgata
caagccacttcgcaggcgggtagcctccagcagcaattattagcgcttgagcaacagcag
ccttcagcacagctacgccaacaatggggcgaactccagcaacagcgggccacacggcaa
caattagctgcactatcgcctttggcacaacaagtccagtcactgctcgataagcaacaa
cagcaattcgttagccagcagcaacagctaaaactgcttgagcagcagttggcagaaaaa
cgtcagttgtataaacagcaaaaacagcatctgacagatctggaaagcttgtgggagcgc
gaaaaacagatagccggattagaggcggaaagggccaaactgcaatcgggaaaagcctgc
ccattatgtggggcgttggatcatccggccgttactgagtatcaggcggtacaaccctca
gaaacggctaaacgtgttgaagaactgcgccttcaagtcgatcaactcttcgccgccgga
acggagttgcgcactcaggtagagagtgtgcagcaacagcagcaacgtttggagcaagaa
gtacaacaaaacagccagcaattggctgattataaaaagctttggcaaaaactggcacaa
ccactggcactgacattcgccttgaatgaacctgcagctttagcgacttggttagaacag
caggaacagttagaacaaaactgccaacaacaactggccgaatatgagcgtttaaatcag
caacatcagcaagcgaaggatgttctggctcaagctgaacagcagcagcaaaaacatctg
caacagttggcattaatcacgcagcgtcaacaagatacccagcaatcccaccagacgtta
ttagcgcaacatcaacgccagcaggatgagttagcactgatgcgtcagggcttccacaat
gcgctggctgaattatcactctcaacccctggaacagaccaacaacagagttggctgaca
cagcgggaagaagagagccaacgctggcagcagtaccagcaagagcagcaacaacgggtg
ctggagcaaaaagcactggagacgcggattgaagatgagcgccgccatttgcaagcgtac
gttgatcaattaactgagctgactcagcagcatcaacagaccgaaaccctactccaacag
taccatcagcagcgccatgaactgtttggcgacagtcgtgttagtgaagcgcgccagtta
ttacgtctgcaacagcagcaggtggatctggtacagcaaaacgccgcagaagccctgcaa
ctggctcaatcccagctcagccgattatccggtgaattggaggggttagagcagcaatac
ctgcataatcagcagcgtgtggcagcagctcaagctgagttgcaacaggcactggagatt
agtgagttcacagatgaagcggcactgactgcagccttgctgagtgaagaagagaggcaa
catttgcagcaattgcaactgcaattgaacgagcggcaacaacaaatccatatccgtcag
cagcaaaccaacgaagcgctggaacaacatttacaacagtgcccatcgggtgtcgatcgg
acatctgaattggcagtgttacagttgcaatcggaacaactcttagcacagctgaaaacc
aataccttacgccaaggtgaactacgcaatcagctcgaaagtgacgtagctcgccgtaac
aaccaacacgcactgtttgaacaaattgaacgtagccagcagcaatatgatgactggagc
tatctcaatcagttaattggctccaaagaaggtgataaattccgcaaatttgcccaaggg
ctgacactcgatcatctggtctatttagccaataaccaactcagtcgcttgcatggccgc
tatctgttgcagcgcaaaaccagtgatgcactggagctgcaagtggtggatacatggcaa
gccgatgccatacgcgatacccgtacactatcaggaggtgaaagttttctggttagtctg
gcgctggcactcgcactgtcggatctggtcagtcataaaaccagcattgactcactgttc
ctcgatgagggcttcggcacgctggatgcggaaacactggataccgcgctggatgcactt
gatagcctgaatgcgtcgggtaaaactataggtgtcatcagccatgttgaggcgatgaaa
gaccgaattccggtgcaaataaaagtgaagaaagtcaacggactgggtgtcagtcgttta
gataatatcttccgcgtcaatccagactga
DBGET
integrated database retrieval system
