Yersinia aleksiciae: ACZ76_17605
Help
Entry
ACZ76_17605 CDS
T03994
Symbol
hmsH
Name
(GenBank) biofilm formation protein HmsH
KO
K11935
biofilm PGA synthesis protein PgaA
Organism
yak
Yersinia aleksiciae
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PgaA_barrel
TPR_19
TPR_14
TPR_7
TPR_2
Coatomer_E
TPR_16
TPR_11
TPR_1
Msg2_C
TPR_6
Motif
Other DBs
NCBI-ProteinID:
AKP35208
LinkDB
All DBs
Position
3930989..3933457
Genome browser
AA seq
822 aa
AA seq
DB search
MYNAFTTLLRPLHRHRITLLALLISGLSVNPVMAETQYDSLIIKARAGDTAPVLDYLQKE
ANAGPLNSSQVDDWLQIAGWAGRNQEVIDVYEKYHSSMNLSSRGLAATARAYRNEKRWDQ
ALALWQSSLKKDPTNPDLITGMIMTQADSGRGGEALQQAKALAESNPSAKNYMTLSYLNR
ATNRNYDALQASSEAVRLAPESEEVLKNHLEILQRNRIADPALQLAKENPKLVTAEQYRQ
LERDAAAEQVRMAVLPTRSETERFYIADQALADYQDLLTRWSKDPEAQADYQRARIDRLG
ALLVRRNTAELITEYEAMEAEGYKMPDYARRWAASAYIDRRMPEKAAPILTSLYYADGKT
FRNSDDLLDADDLYYALNESEQLDKAHQFAKNYSEQTPYQVGVYGLPGKEPNDDWMEGQT
LLVQSLVALNDLPAAQKKLETLSSTAPANQNLRIALAGVYLARDLPRKSEQELKAIESLA
PRSLILERAQAETAMDLQEWHQMELLTDDVIARSPEDVPSQELDRQRQVHNMYELRIVGN
RTISSNSPISGSKDFGIETLLYSRPIAENWRVFGGGNYDNAQFEEGKGINRTMRLGGEWT
SRGFWAEAEVNNQNYGFGNKTGARLASWYDFNDHWRVGGQVERLAKDTPLRALKSNISSN
SASAFVLWKADDRRDVEFNVTPSDFSDGNKRWEYELNGRQRIWTGPYLTADFSLGLAAST
NTKEDVIYYNPKRDFTYLPAVTFNHIMYRHYKTIWSQQIQLGVGGYWEKNFGNGMVTTAG
YGQRVQWNDVVDTGVAVTYDKRPYDGVREHNLSLAFDLNYRF
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
atgtataacgcatttacgacactgctgcgcccgttgcatcggcacagaattactttatta
gctctattaatttccggcctttcagttaaccccgttatggcagaaacacagtatgattca
ttaatcatcaaagccagagcaggggatactgcgccggtccttgactatttacaaaaagaa
gctaatgccggtccacttaatagcagtcaagttgatgactggctacaaatagccggttgg
gcagggcgcaatcaggaagtgatcgacgtttacgaaaaataccactcttcaatgaatcta
tcctcccgtggcttagcggcgacggcgcgtgcttatcgcaacgaaaaacgttgggatcaa
gctttggctctgtggcaaagcagtttgaagaaagacccaaccaaccccgatcttattacc
ggcatgatcatgacccaggctgactctggccgtggcggtgaggcgttgcagcaggcaaaa
gcgttggccgagagtaatccctccgcaaaaaattacatgacgttgtcctatttgaaccga
gcaaccaaccgtaattatgatgcattgcaggcttccagtgaggcggtgcgattggcacct
gaatctgaggaagtattaaaaaatcaccttgaaatcttgcaaagaaaccgcattgccgat
cccgcattacagcttgctaaagagaatccgaaacttgtcaccgctgagcaatataggcaa
ctagagagagatgcggcggcggagcaagtccggatggctgtgttaccaacgcgcagtgag
actgagcgtttctatattgctgatcaggcgctggcagattatcaggatctgttaactcgc
tggagcaaagacccagaagcccaggcagattaccagcgggccagaattgataggcttggt
gcattgttggttcgccgtaatacagccgagctgattacagaatatgaagccatggaggct
gaaggctacaaaatgcctgactacgctcgtcgttgggccgcttccgcttatatcgatcgc
cggatgccagaaaaagccgctccgattttaaccagtttgtattacgccgatggtaaaact
ttccgcaacagtgatgatttgcttgatgccgatgatctctattacgcgctgaatgaaagt
gagcagttggataaggcacatcaatttgctaagaactatagcgagcaaactccgtatcaa
gttggggtttatggtctgccaggtaaagaacctaatgacgattggatggaaggtcagacg
ttgctggttcagtctttggtcgctctcaacgatctgcccgcagcacagaaaaagttagaa
actttatccagcacagcacccgctaaccagaatttacgtattgctttagcgggtgtttat
ctggctagagatttaccgcgtaaatctgaacaagagttgaaagcgattgaatcattggca
ccacgcagcctgattctggaacgtgcacaagctgaaacagcaatggatttgcaggagtgg
catcagatggagctcttaaccgatgatgtgattgctcgctcgccagaagatgtcccgtca
caggaattagaccgtcaacgccaggttcataatatgtatgagctgcgtattgttggtaac
cgcaccatctcttccaatagccctatcagcggtagcaaagactttggtattgaaaccctg
ctctatagccgaccgatagctgaaaactggcgggtatttggtggtggtaactatgacaat
gcgcaatttgaggaagggaagggtattaaccgcaccatgcgtttaggcggcgagtggacg
tcccgtggtttttgggctgaggctgaggtcaataatcagaattacggtttcggtaataaa
accggtgctcgcttagcaagttggtacgactttaacgatcactggcgagtcggtggtcag
gttgaaagattggccaaagataccccgctgcgcgccttaaaaagtaacatttcgtctaat
agtgcttctgcctttgtgctgtggaaagccgacgatcgccgtgacgtggaattcaatgtc
actccatcagacttctctgacggtaacaaacgttgggagtacgagttaaatgggcgtcaa
cgtatctggactgggccctacctgacggcggacttcagtttgggtctggcggcgagtact
aataccaaagaagatgtgatctactacaacccaaaaagagattttacttacctcccggcg
gtcaccttcaatcatattatgtatcgccactataaaaccatttggagccaacagattcag
cttggtgtcggtggttattgggagaaaaacttcggtaacggcatggtcaccacggcaggt
tatgggcaacgggtgcagtggaatgatgttgtcgatactggcgttgctgttacctatgat
aagcggccctatgatggtgtccgtgagcacaacctttcactcgctttcgatttgaattac
cgtttctaa
DBGET
integrated database retrieval system
