Yersinia aldovae: AT01_1048
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Entry
AT01_1048 CDS
T03605
Name
(GenBank) apurinic endonuclease family protein
KO
K01151
deoxyribonuclease IV [EC:
3.1.21.2
]
Organism
yal
Yersinia aldovae
Pathway
yal03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yal00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AT01_1048
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yal03400
]
AT01_1048
Enzymes [BR:
yal01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.21 Endodeoxyribonucleases producing 5'-phosphomonoesters
3.1.21.2 deoxyribonuclease IV
AT01_1048
DNA repair and recombination proteins [BR:
yal03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AT01_1048
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AP_endonuc_2
Motif
Other DBs
NCBI-ProteinID:
AJJ63300
LinkDB
All DBs
Position
1115825..1116667
Genome browser
AA seq
280 aa
AA seq
DB search
MKFVGAHVSAAGGVDQAVIRAHELEATAFALFTKNQRQWRAAPLAQDVIEKFKQACEQYG
YTSAQILPHDSYLINLGHPVTDALEKSREAFLDEITRCQQLGLSLLNFHPGSHLLQIDEE
KCLARIAESINIALDASEGVTAVIENTAGQGSNLGFKFEHLAAIIAGVEDKSRVGVCIDT
CHAFAAGYDLRTEEDCEHTFKQLGDIVGFQYLRGMHLNDAKSEFNSRVDRHHSLGEGNIG
KTVFSYIMRDPRFDNIPLILETVNPDIWAEEIAWLKSQAE
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
atgaaatttgtcggtgcacatgtcagcgcagcaggtggagttgatcaggctgtgattcgg
gcgcacgaacttgaggccactgcctttgccctgtttaccaagaatcaacgccaatggcgc
gccgcgccattggcgcaagacgtgatcgaaaagtttaagcaagcttgtgaacaatatggt
tatacctccgcccagatcctgccacacgatagttatctgattaacctcggccatccggtt
actgacgcgctggagaaatcccgcgaagcctttcttgatgagataacccgttgccagcaa
ctggggctatcgttactgaatttccatcccggcagtcatttactgcaaattgatgaagag
aagtgtctggcacgcatcgcagaatcgatcaatatcgcgctggatgccagtgagggagtg
accgctgtcattgaaaatactgccggccaaggcagcaacctcggttttaagtttgaacat
ctggccgctatcattgcgggcgtggaagataaaagccgcgtcggtgtctgcattgatacc
tgccatgctttcgccgctggttatgatttgcgcactgaagaggattgtgagcataccttc
aagcagctcggtgatatcgtcggtttccagtatttgcgtggtatgcatcttaatgatgcc
aaaagtgaattcaacagccgtgtcgaccgccaccacagtctcggtgaagggaatatcggc
aaaaccgtgttcagttatattatgcgcgatccgcgtttcgataatattccgctgattctg
gaaacagtcaatccagatatctgggccgaagagatagcctggctgaagtcgcaagccgaa
taa
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